Pseudoalteromonas sp. A25: PA25_05720
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Entry
PA25_05720 CDS
T07990
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA25_05720 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psaz03019
]
PA25_05720 (recQ)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_05720 (recQ)
Enzymes [BR:
psaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PA25_05720 (recQ)
Messenger RNA biogenesis [BR:
psaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA25_05720 (recQ)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PA25_05720 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
HEM4
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BBN80587
UniProt:
A0A5H2YCM5
LinkDB
All DBs
Position
1:complement(633872..635689)
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AA seq
605 aa
AA seq
DB search
MENQVLKTDQTHTYTVLKDVFGYSEFRDGQNAVINAVLESQDALVLLPTGGGKSLCYQIP
ALTLPGLTVVVSPLISLMQDQVAQLKALEINAEFVNNSLTFEQQQVIYQRLHLGDIKLLY
VAPEKVLQYEFKERLKQLNISLFAIDEAHCVSHWGHDFRPHYCRLSELKQHFPSVPMMAL
TATADTATRRDIVQQLGLNQPYIHTGSFDRPNIRYTVEEKFKPLSQLMRYLRAQKGQSGI
IYCTSRKRVDEIAQKLADAGFNAAAYHAGMSNEQRQFVQSAFAKDDIHIVVATVAFGMGI
NKSNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVKRFFEDIEDEHR
RRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREPCGNCDICLNPPKRFDGTLVAQQAL
SCVYRAEQRFGLGYIVDILRGANTSRVRDNQHHTLSTYGIGKQHSNEYWLSVLRQLIHHG
LLTQDITQGACLRLTEAARAVLKGEYALQLAEPRLQAQHVYQDKLAKFNYDKRLFAKLRS
LRKQLADEDDVPPYVVFNDKTLAEMAQRMPTNDSEFLQVSGVGFTKLSKYGAPFMQLIRN
YLAAS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaagtgcttaaaactgatcaaacccatacgtacactgtgctcaaagacgtt
tttggctacagtgagtttcgtgatggccaaaatgccgtgataaatgcggtattagaatct
caagacgcactcgttttgctaccaacaggcggcggaaaatcactttgctatcaaattccg
gctcttaccttacctgggttaaccgttgttgtatcgcctcttatttctttaatgcaagac
caagtggcccagttaaaagcgctggaaatcaacgctgagtttgtgaataacagtctcacg
tttgaacagcaacaggttatctatcagcgtctgcacttaggagacataaagctgctttat
gtcgcaccagaaaaagttctgcagtatgagtttaaagagcgcttaaaacagctaaacatt
agtttatttgccattgatgaggcgcattgcgtatcacattggggccatgactttaggcct
cactattgtcgcttgagcgagcttaaacaacattttccatctgtaccaatgatggccctg
actgcaactgcagataccgcgacacgcagagatattgtccagcagttggggttaaaccag
ccttacattcacaccggcagcttcgatagacctaatatacgctataccgtcgaggaaaaa
tttaagcctctatcacaacttatgcgctatttaagggcacaaaaaggtcaaagtggcatt
atttactgcacgagtcgaaaacgcgtagacgaaatagcacaaaaactggcggatgcaggg
tttaacgcagcagcgtatcacgcaggaatgagcaacgagcaacgtcaatttgtgcaaagc
gcttttgccaaagatgatattcatattgtcgttgcaaccgtcgcttttggtatggggatc
aataaatcaaacgttcgctttgtcttgcattacgacatacctaaaagcattgaggcgtat
tatcaggaaaccggtcgtgcaggtagagatgggctcgccgcagaagccataatgtacttc
gatcctgcggatataggtcgcgtaaagcgcttttttgaagatattgaagacgagcataga
cgcagagtcgaagagcaacgctttaatgctatggctagctttgccgaagcacaaacgtgt
cgtcgtcagatcttacttaactactttagcgaataccaacgagaaccatgtggaaactgt
gacatttgtttaaaccccccaaaacgttttgacggcacgctggtcgcacaacaagctttg
tcttgcgtatatcgtgctgagcagcgctttggtttaggctatatcgtagatatattacgt
ggcgctaacaccagtcgggtaagagacaaccagcaccatacattaagtacctatgggatt
ggtaaacagcatagcaatgagtattggctcagtgtgcttaggcaacttattcatcatggt
ctactaacccaagatataacgcaaggcgcatgcttgcggttaacagaagccgctcgtgct
gttttaaaaggtgaatacgcactacagttagctgaaccaagattacaagctcagcatgtt
taccaagataaactagccaagtttaactatgataaaaggttgtttgcaaaacttcgcagt
ttgcgcaaacaacttgccgatgaagatgacgtaccaccctatgtggtatttaatgacaaa
acactggcagaaatggctcaacgcatgccaaccaatgacagcgaatttttgcaagtttcc
ggtgtcggctttaccaaactaagcaaatatggcgcaccttttatgcaattgatccgcaac
tatcttgccgctagttaa
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