Pseudoalteromonas sp. A25: PA25_06990
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Entry
PA25_06990 CDS
T07990
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PA25_06990 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_06990 (ung)
Enzymes [BR:
psaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PA25_06990 (ung)
DNA repair and recombination proteins [BR:
psaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PA25_06990 (ung)
Prokaryotic type
PA25_06990 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tox-HDC
Motif
Other DBs
NCBI-ProteinID:
BBN80714
LinkDB
All DBs
Position
1:805329..805988
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AA seq
219 aa
AA seq
DB search
MTTWEDLLAQEKQQSYLQETLSYVAQRRSEGVTVFPPQEQIFEAFKMTPFDKVKVVILGQ
DPYHGPNQAHGLCFSVLPGVKPPPSLANMYKELAQDIAGFTIPEHGYLRAWAEQGVLLLN
TVLTVEQGSAHSHKKLGWERFTDVVIEQINAHSEGVIFLLWGAHAQKKGKNIDAQRHHIL
HAPHPSPLSAHRGFFGCQHFSKTNHLLQNMGKQPINWQV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtgggaagatttactcgctcaagaaaaacaacaaagctatttgcaagaaacc
ttgagctatgtggcgcaaagacgcagtgaaggtgtcacggtattcccgccgcaagagcag
atatttgaagcattcaagatgactccttttgataaagtgaaggtcgtgattttagggcaa
gatccctatcatgggcctaatcaagcacatggtctgtgtttttctgtactaccgggagtc
aagcctccgccctcattggcaaacatgtataaagagctagcgcaagatatcgcgggtttt
actatacctgagcacggctatttgcgcgcatgggctgagcaaggggtactgttacttaat
acggtattgacggttgagcagggcagcgcacactcacataaaaaactaggatgggagcgc
tttacagatgtggtcattgagcagataaatgcacacagcgagggagtgatatttttactt
tggggagcacacgctcagaaaaaaggcaaaaacatagacgctcagcgccatcatatattg
catgctccacacccatctcctttatctgcccatcgtggcttttttggttgtcagcatttt
tcaaaaactaatcatctactgcaaaatatgggaaagcagcctattaactggcaggtataa
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