Pseudoalteromonas sp. A25: PA25_07120
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Entry
PA25_07120 CDS
T07990
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03410
Base excision repair
psaz03430
Mismatch repair
psaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PA25_07120 (recJ)
03430 Mismatch repair
PA25_07120 (recJ)
03440 Homologous recombination
PA25_07120 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_07120 (recJ)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PA25_07120 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PA25_07120 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PA25_07120 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BBN80727
UniProt:
A0A5H2YD22
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All DBs
Position
1:819128..820855
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AA seq
575 aa
AA seq
DB search
MNTHIKARQRVDDSHLPSHLHPVIKQIYASRGVQTATELDNRATTLLDFRLFKDIEIACD
ILQSALYAQARILIVGDFDADGATSTAVLMEGLTQFGYQHVDYLVPDRFSLGYGLSPALA
EQIVGLKPDLVITVDNGISCIAGIDIVKQAGIQVIVTDHHLQGEQLPNADAIVNPNQHGC
QFPSKSIAGVGVAFYVLVALRHHLRAQGYFTDSGQPEPNLASLLDIVALGTVADVVALDA
NNRTLVYQGLARIRNGHTRPGIEALIEVSNRNAARLNASDFGFALAPRLNAAGRLDDMSL
GIACLLSKDINQARRIAGELDSLNHERREIEQGMQQEALAVLERLVMSTQVVPDALCLYQ
DDWHQGVIGILAGRLKEQYHRPTVIFAQGDHGELKGSCRSIEGIHMRDLLESLNTQYPDL
IVKFGGHAMAAGLTIQESNFEQFKRVFVSTVGDNLSEEHKQSVLLTDGALPSECFSMEFA
QLLQQAGPWGQHFPEPVFYGEFELVQQRIVGEKHLKLVLKHASGKLVDAIAFNVDVKAWP
NTQALLAQVAYQLDINEFRGKFSLQLIVREISAIT
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccatatcaaagctcgtcaacgtgtcgacgatagtcatttgcccagtcactta
caccccgttattaaacaaatttatgcaagtagaggtgtgcaaacggcaactgaacttgat
aaccgagctacaacgttactcgactttcggttgtttaaagatatagagattgcatgtgac
atattgcaatcagcattatacgcacaagcaagaatattgattgtaggagactttgatgct
gatggggcaaccagtactgcggttttgatggaagggttgacgcaatttggctatcagcac
gtagactacttggttccagataggtttagccttggttacggtttaagcccagcgcttgct
gaacaaattgttgggctcaagcctgatcttgtgatcacggtagacaatggcatttcttgt
attgctggaatagacattgttaaacaagcgggcattcaagtgattgttaccgaccaccat
ttacaaggcgaacagttgcccaatgcagatgcgattgttaaccctaatcagcatggttgt
cagtttccctcaaagtcaattgcgggtgtcggggtcgcattttatgtcttagttgcactg
cgtcatcatttacgcgcgcaaggctactttactgactcagggcaaccagaaccgaattta
gcatcactgctggatatcgtagcgttggggactgtggcggatgttgtggcattagatgcg
aacaaccgaacgttggtttatcaagggttagcccgcattcgaaatggccatacacgccca
ggtattgaagcgcttattgaagtgtctaatcgcaatgccgcaagattgaatgccagtgat
ttcggttttgctttggctccacgactcaatgccgcaggcagattagatgatatgagcctg
gggatcgcgtgtttgctgtcaaaagacatcaaccaagcacgacgcattgccggtgaattg
gatagcttaaaccatgaacgacgtgagatagagcagggtatgcagcaagaggcgcttgct
gtattagagcgtttggtaatgagcacacaagttgtgcctgatgcgctatgtttgtatcaa
gatgattggcatcaaggcgtgattggtattttagcgggtcgtttaaaagagcagtatcat
cgtcccacagtgatatttgcccaaggtgatcatggtgagctcaagggatcatgccgctct
attgaagggattcatatgcgagacttgttagagtcgctcaatacgcaatacccagatttg
atagttaagtttggtggccacgccatggcggctggattgacgatacaagagtcaaatttt
gagcaatttaaacgggtatttgtcagtaccgttggtgacaatttatctgaagagcacaaa
cagagtgtgctcttgaccgatggcgcgcttcctagtgagtgcttttctatggagtttgcg
caattgttgcaacaagcagggccatgggggcagcattttcctgaacctgtcttttatggc
gagtttgagcttgtacagcaacgtattgtgggggaaaagcatctaaaactagtgttaaag
catgcctctggcaagttggtggatgctattgcttttaatgttgatgttaaagcttggcct
aatacacaagcacttttagctcaggtcgcatatcaattggatattaacgagttcagaggc
aagttttcattacagttaatcgtgcgagaaatcagcgcaattacctaa
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