Pseudoalteromonas sp. A25: PA25_08540
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Entry
PA25_08540 CDS
T07990
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psaz03016
]
PA25_08540 (truB)
Enzymes [BR:
psaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PA25_08540 (truB)
Transfer RNA biogenesis [BR:
psaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PA25_08540 (truB)
Prokaryotic type
PA25_08540 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBN80869
UniProt:
A0A5H2XUJ1
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All DBs
Position
1:996583..997518
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AA seq
311 aa
AA seq
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MARRSKGRPVDGIVLLHKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETREVSIDRDTLQHAVNSFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYSLTLDEYDAQNEEIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSKVGHYPSEKMVTIEQLEEKLQQAKSEGVEPSTYLDE
LLLPMDTALVDLPIVEISQEQGKAFSHGQVVVCGEVPDGIIKVVADGQFIGIGERNADGH
LKAKRALSSNQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgttcaaaaggccgtccagtcgatggtattgtgctgctgcacaagccacaa
gggatctcgtcaaataaggcgttgcaacaagcaaaaggtatatattttgcacaaaaagct
gggcataccggcgcgcttgacccactggccactggtatgttgccaatttgttttggggaa
gcgaccaagtttacccagtttttgttagacacggataaaacttacgttgtccgtgccaaa
ctaggcgagcgcacaacgacttctgactcagacggtgaagtagttgaaaccagagaagtc
tctatcgacagggatacattacaacacgcggtcaacagctttttaggtgaatctgatcag
tatccttcgatgtattcggcgttaaaatatcaaggtcagcctttatataagtatgcgcgt
gaaggcattgaagtaccgcgcaaatgccggaaaattaacgtttatagcctaacgcttgac
gaatatgatgcgcaaaatgaagaaattcaaatgacggcacatgtgtcaaaaggcacctat
atccgtacaatcgttgatgatcttggcgagaagcttggttgtggtgcgcacgttattatg
ttgcaccgctcaaaggttggccattacccaagtgaaaaaatggtgacaatagagcagctt
gaagaaaagcttcagcaagcaaagtcagaaggtgttgagccatcaacatatttggatgag
ctgctgttgccaatggataccgctttagtggatttacctattgtggagatatcacaagag
caaggcaaggcattcagtcatggtcaggttgtggtatgtggtgaagtaccagacggtatt
atcaaggtggtggctgatggtcagtttattggcattggtgagcgtaacgctgatggccat
ttaaaggctaaacgggctttatcgagtaatcaataa
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