Pseudoalteromonas sp. A25: PA25_09720
Help
Entry
PA25_09720 CDS
T07990
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psaz01011
]
PA25_09720
Enzymes [BR:
psaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PA25_09720
Peptidoglycan biosynthesis and degradation proteins [BR:
psaz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PA25_09720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM_OapA
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
BBN80987
UniProt:
A0A5H2YDR5
LinkDB
All DBs
Position
1:complement(1132317..1133885)
Genome browser
AA seq
522 aa
AA seq
DB search
MNKLSISLVLTVLLSGCQTVSDSNQSMELSASQLNSASPAEISDTLLNAIQEPIEVDEPA
PVFDDVWERIRYQLSIDVPQNRPVVAERNYYQRHQAYLDRISKRAEPYLYFIVEEVEKRQ
MPIEIALLPIVESAFDPFGYSHRSASGIWQFMPKTGERFNLKQNWWYDGRRDIVQSTRAA
LDYLSYLHKTLEGDWLNAIAAYNSGEGRLLKAIRKNRKKHLPTDFWSLDLPRETTAYVPK
LLALSDLLKRQDEFNVHWKKIINAQVVESVDVGSQIDLALAADMADISLTELYRLNPAFN
RWASDPNGPHSLLLPADKVDVFKEKLAATPVKDRLRWQHYAVKRGDTLSVIAAKFSTSAS
AIQSLNKLDSHIIRIGQNLLVPLSEGELKSEHLPSNVRNSIAKTQRAKKVHVVTNGDTLW
DISREYDVTIKQLASWNKLKPSSILRLGQKLTVYQQAKNEQINTNTTNRTITYKVRRGDS
LARIASKFNLTIKEIVKWNDLQGQKYLYPGQKLKLQVDVKSS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattgtcaatttccttagtcttaacagtgcttttgagtggctgtcaaactgta
tcagattcaaaccaatcaatggagttgtcggcatcacaactaaatagtgccagcccagca
gagatcagcgatacattactcaatgcaattcaagaacctatagaagtcgacgagccagcc
cctgttttcgatgacgtatgggagcgcatccgttatcaactatcaattgatgtgccacaa
aatcgacctgtagttgctgaacgtaactattaccaacgccatcaagcgtatttagatcgt
atttcaaagcgtgcagaaccctacttgtactttattgttgaggaagtagaaaagcgccaa
atgccaatagaaatagcactacttccaatcgttgaaagtgcttttgacccttttggctac
tcacaccgcagtgcttctggcatttggcagtttatgccaaaaaccggtgaaagattcaat
ctaaagcaaaactggtggtatgacgggcgtagagatattgttcagtcaacccgagctgcc
cttgattatttgagctatcttcacaaaacactagaaggcgattggcttaatgccattgca
gcctataactccggtgaaggaaggttactaaaagcaattaggaagaaccgcaaaaaacat
ttgccaaccgacttttggtctttggatttacctcgcgaaaccaccgcttatgtacctaag
ctactagccttgtctgatctgttaaaacgacaagatgaatttaatgttcactggaagaaa
attattaacgcacaagttgttgagtccgttgatgttggctcgcaaatcgacttggcactt
gccgctgatatggctgatatttctctaacagaactttatagacttaacccagctttcaac
cgttgggcgagcgatccaaatggtcctcattcactcttacttcctgcagacaaagtagat
gtatttaaggaaaaactagcagcaacgcctgttaaagatcgcttacgctggcagcactat
gcagttaaaaggggtgatacgctttcagtcatcgcagctaagttttcaactagtgcaagt
gctattcaatcattaaataagctagactctcatattatccgcataggccagaatttactt
gttccgcttagtgaaggagagttaaaaagcgagcatctcccatcaaatgttagaaattct
attgccaaaacacaacgcgctaaaaaggttcacgttgtcaccaacggggatactttatgg
gatattagccgtgaatacgatgtcacaataaaacaactcgccagctggaataaactcaag
cctagctctattttgcgattgggacaaaagctgacagtttatcagcaagcaaaaaacgaa
cagataaacacgaataccaccaaccgtaccattacttataaggtaaggcgtggtgactca
ttggctagaattgcatcaaagttcaacctcacaataaaagaaatagtgaaatggaacgat
ttacaaggacagaagtacctttacccagggcaaaaattaaaactccaagtggatgtgaaa
agttcataa
DBGET
integrated database retrieval system
