Pseudoalteromonas sp. A25: PA25_09760
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Entry
PA25_09760 CDS
T07990
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03030
DNA replication
psaz03430
Mismatch repair
psaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA25_09760 (dnaQ)
03430 Mismatch repair
PA25_09760 (dnaQ)
03440 Homologous recombination
PA25_09760 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psaz03032
]
PA25_09760 (dnaQ)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_09760 (dnaQ)
Enzymes [BR:
psaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PA25_09760 (dnaQ)
DNA replication proteins [BR:
psaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PA25_09760 (dnaQ)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PA25_09760 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
BBN80991
LinkDB
All DBs
Position
1:1136086..1136793
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AA seq
235 aa
AA seq
DB search
MLKRQIVLDTETTGIDPKAGHRIIEIGCVELINRRLTGNNFHVYINPHREIEEEAIDVHG
ITNEFLRDKPMFNQVAQEFFDYIKGAELIIHNAPFDVGFMDHEFAMLNQGFPATHEYCQV
LDTLVMARNLHPGQKNNLDALCRRYDIDNSKRTLHGALLDSEILADVYLGMTGGQVKLNL
ASGNESNEQDDGGSIRRLAPDRARLKVVKASSDELLAHEARLQLVNKDGNTLWQK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaggcaaatagtcctagatacagaaacaacagggattgaccctaaagcaggc
cataggatcattgagatcgggtgtgtagaattgatcaatcgccgtttaacaggcaataac
tttcacgtatacatcaaccctcacagagaaattgaagaagaagccatcgatgtacacggt
attaccaatgaatttttgcgtgataagccaatgtttaaccaagttgcgcaggagtttttt
gactatataaaaggtgcagagcttattattcataatgcaccgtttgacgttgggtttatg
gaccatgagtttgctatgcttaatcaaggctttcctgctacgcatgagtactgtcaagta
ttagacacgctcgttatggcgcgtaatttgcacccaggtcaaaagaataacctagatgca
ctatgtcgacgctatgatattgataactcaaagcgtacattacacggcgctttactggat
tctgagatattagctgatgtttatcttggtatgacagggggccaggttaaactgaacttg
gcatcaggtaatgaatcgaacgagcaagatgacggcggtagtattcgtcgattagcacca
gacagagcaaggctaaaagttgtaaaagcgtcttctgatgaactgttagcccacgaagct
agattacaattggttaataaagatggcaatacgctgtggcaaaagtaa
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