Pseudoalteromonas sp. A25: PA25_10900
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Entry
PA25_10900 CDS
T07990
Symbol
flrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz02020
Two-component system
psaz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PA25_10900 (flrC)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PA25_10900 (flrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psaz02022
]
PA25_10900 (flrC)
02035 Bacterial motility proteins [BR:
psaz02035
]
PA25_10900 (flrC)
Two-component system [BR:
psaz02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PA25_10900 (flrC)
Bacterial motility proteins [BR:
psaz02035
]
Flagellar system
Flagellar assembly proteins
Others
PA25_10900 (flrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
FleQ
Mg_chelatase
HTH_30
MerR
AAA_16
AAA
HTH_24
DUF2089
AAA_14
HTH_5
AAA_7
AAA_19
MFD_D3
nSTAND3
HTH_20
AAA_3
Sigma70_r4_2
AAA_22
HTH_17
MCM
HTH_Crp_2
HTH_23
Xre-like-HTH
NB-ARC
HTH_50
Motif
Other DBs
NCBI-ProteinID:
BBN81105
UniProt:
A0A5H2XZ67
LinkDB
All DBs
Position
1:1262101..1263486
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AA seq
461 aa
AA seq
DB search
MSHSILVVEDDAGLREALIDTLQLSGFDCVEASSAEQAVVLLKQHSYSLVVSDVQMGAMS
GIDLLKTIKLNYPDLPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYMPP
KDKETEGPVVKDPQSLKLLELAAKVAKSDASVMVLGPSGSGKEVLARYIHDKSERAEESF
VAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQKGTILLDEITEMDLGLQAKL
LRVLQEREVERLGGRKTIELDVRVLATSNRDLKEAVAAGDFREDLYYRLNVFPLMWLPLC
ERPGDIEVLAEHLIARHCVKAGKPTPTLSHEAKQKLLSHQWPGNVRELDNVVQRALILQH
GNQVNADDIFIESHQAVTTNRYDKQQAPIEVELKTQCDVSDSGEGQSYKAELQDKEHQMI
LDTLSRCQGKRKEVAELLGMSPRTLRYKLAKMRDMGIPLPA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattctattttagttgtggaagatgatgcagggcttagagaagctttgatagac
accttacagttatctgggtttgattgtgttgaagcatctagtgcagagcaggcagtggtg
ttgttgaagcaacatagctattctttggtagtgagtgatgtacagatgggggctatgagt
ggtattgatttacttaaaaccataaaacttaactaccctgatctacccgttttaatgatg
acggcctatgcaacgattgatgatgcggtggaagcaatgcgcttaggtgccattgactat
atggctaagccttttgcgcctgaagttttactcaatatggttagccgttatatgccgcct
aaagataaagaaacagaaggccctgttgttaaagatccgcaaagcctaaaattgcttgaa
ttggcagcgaaggtcgcaaagtcagatgcgagcgtgatggtacttggacctagtggttca
ggaaaggaagtgttggctcgctatattcatgacaaatcagagcgtgcagaggaaagtttt
gttgcaataaactgtgcggcgatccctgaaaatatgcttgaagcgacattatttgggtat
gaaaaaggcgcttttacaggagccatccaagcttgcccaggtaaatttgaacaagctcaa
aaaggtactatattgcttgacgagatcactgaaatggatctcggtttgcaagctaagttg
ttaagggtattgcaagagcgtgaggttgagaggctcggtggacgtaagaccatagagctg
gatgtgcgagtgcttgcaactagtaaccgagatcttaaagaagctgtggcagcgggcgat
tttagagaagacttgtactatcgcctgaatgtttttccattaatgtggttgcctctttgc
gaacgcccaggtgatattgaagtactggcagagcacttgattgctagacattgtgttaaa
gcaggaaaacccacgccaactttaagtcatgaggcaaagcaaaaactactctctcaccag
tggcctggaaatgtgagagaattagataatgttgttcaacgcgccttaattttgcaacat
ggtaatcaagtgaatgcggacgatatctttattgaaagccatcaagctgtaacaaccaat
cgttatgataagcaacaggcgccaattgaggttgagttaaaaacccaatgcgatgtgtca
gatagcggtgaaggccaaagctacaaagctgagctgcaagacaaagagcatcaaatgatc
cttgatacactatctcgctgtcaaggaaagcgcaaagaggttgcggagttgttaggtatg
agcccaagaactttgcgatataagttggccaaaatgcgtgatatgggcatacctttacca
gcttaa
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