Pseudoalteromonas sp. A25: PA25_12970
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Entry
PA25_12970 CDS
T07990
Symbol
hupB_1
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psaz03032
]
PA25_12970 (hupB_1)
03036 Chromosome and associated proteins [BR:
psaz03036
]
PA25_12970 (hupB_1)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_12970 (hupB_1)
DNA replication proteins [BR:
psaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PA25_12970 (hupB_1)
Chromosome and associated proteins [BR:
psaz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PA25_12970 (hupB_1)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PA25_12970 (hupB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
MvaT_DBD
Motif
Other DBs
NCBI-ProteinID:
BBN81312
UniProt:
A0A5H2Y9B0
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All DBs
Position
1:1575586..1575858
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AA seq
90 aa
AA seq
DB search
MNKSELITAMSSHSALTKKESQAALNALLAVIKKRLSEGDHMPISGLGTFALSYHPAKAG
RNPKTGETILIEGANKVQFKAAKALKNALA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaattgataacggccatgtcatcacacagtgcactaactaaaaaagag
tcacaagccgcgttaaacgcattgttagcggttatcaaaaagcgtttatctgaaggggac
cacatgccaatctctgggctaggcacttttgctttgagttatcacccagctaaagcaggg
cgcaaccctaaaacaggagagacgattttaattgaaggggcaaataaagtgcagtttaaa
gccgctaaggcgctcaaaaacgccttagcgtaa
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