KEGG   Pseudoalteromonas sp. A25: PA25_13930
Entry
PA25_13930        CDS       T07990                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psaz  Pseudoalteromonas sp. A25
Pathway
psaz03030  DNA replication
psaz03430  Mismatch repair
psaz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PA25_13930
   03430 Mismatch repair
    PA25_13930
   03440 Homologous recombination
    PA25_13930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psaz03032]
    PA25_13930
   03400 DNA repair and recombination proteins [BR:psaz03400]
    PA25_13930
Enzymes [BR:psaz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PA25_13930
DNA replication proteins [BR:psaz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PA25_13930
DNA repair and recombination proteins [BR:psaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PA25_13930
SSDB
Motif
Pfam: RNase_T CAF1 Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: BBN81408
LinkDB
Position
1:complement(1685945..1686646)
AA seq 233 aa
MQGKIISWQGRFKRLAEISKDARLKSFYQQGVPDPFSSLENTEFVALDFETTGLDPTKDD
IVSVGIVPFDLRRIRCGQAKHWLVKPNCVLAEESVILHRITHSQIEMAPDLTQVLDEILY
ALKGKIIVVHYQFVEKTFFHAALMARLGEGIEFPVIDTMMVEKTAIKEHRSWLDWLKRKP
IPSIRLADCRKRYGLPYYQPHHALSDALATAELLQAQSQYCLDPKTMVKDIWQ
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcagggtaagatcatatcttggcaaggacgctttaagcgcctagctgaaatttcaaaa
gacgcgcgactgaaaagcttttaccaacaaggcgtacccgatccattttctagcttagaa
aacacagaatttgttgcacttgattttgaaacaaccggactagacccaaccaaagacgat
attgttagtgtgggtatcgtaccatttgaccttaggaggatccgatgtggccaagccaaa
cactggctagtgaagcccaattgtgtgctcgcagaagagtcggtaattcttcacaggatc
acccattctcaaatagaaatggcacctgatttaactcaagttctagacgaaatattgtac
gctttgaaagggaaaatcatcgttgtacattatcagtttgtcgaaaaaacattttttcac
gccgcgttgatggcaagattgggtgaaggaatagagtttccagttatagacactatgatg
gtagaaaaaaccgctatcaaggaacatcgatcatggcttgactggctcaaacgtaagccc
atcccttcaatacgcttagccgactgcagaaagcggtatggattaccctactaccaacca
catcatgcgttatctgacgctttagcaaccgcagagttattgcaagctcaatcacaatac
tgcttagacccaaaaacgatggtcaaagacatttggcaataa

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