Pseudoalteromonas sp. A25: PA25_16930
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Entry
PA25_16930 CDS
T07990
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psaz03032
]
PA25_16930 (ihfB)
03036 Chromosome and associated proteins [BR:
psaz03036
]
PA25_16930 (ihfB)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_16930 (ihfB)
DNA replication proteins [BR:
psaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PA25_16930 (ihfB)
Chromosome and associated proteins [BR:
psaz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PA25_16930 (ihfB)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PA25_16930 (ihfB)
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
PqqD
DUF1572
NGO1945_C
Motif
Other DBs
NCBI-ProteinID:
BBN81708
UniProt:
A0A5H2XWE9
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All DBs
Position
1:complement(2036665..2036952)
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AA seq
95 aa
AA seq
DB search
MTKSELIEQLAEQHAHIPVKDVENSVKEILEQMAGSLSSSDRIEIRGFGSFSLHYRSPRT
GRNPKTGETVELDGKYVPHFKPGKELRDRVNESIK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaattgatagaacaactagcagagcaacatgcacatatccctgtaaag
gatgtagagaactcagttaaagaaattcttgaacaaatggcagggtcattatcaagctca
gatagaattgaaatccgtggctttggtagtttctcgttgcactaccgttctcctcgcact
ggtcgcaacccaaaaacaggtgaaacagtagagttagatggtaagtatgttcctcatttt
aaaccaggtaaagagctacgcgaccgcgtaaacgaaagcattaaataa
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