Pseudoalteromonas sp. A25: PA25_19610
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Entry
PA25_19610 CDS
T07990
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PA25_19610 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_19610 (recD)
Enzymes [BR:
psaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PA25_19610 (recD)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PA25_19610 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
AAA_16
nSTAND3
SLFN-g3_helicase
AAA_28
PIF1
NTPase_1
T2SSE
MeaB
Mg_chelatase
UvrD_C
FtsK_SpoIIIE
TerL_nuclease
TrwB_AAD_bind
AAA
AAA_5
NPHP3_N
AAA_24
SRP54
Motif
Other DBs
NCBI-ProteinID:
BBN81976
UniProt:
A0A5H2Y3U1
LinkDB
All DBs
Position
1:complement(2350391..2352286)
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AA seq
631 aa
AA seq
DB search
MSQLDLFADIQEAVFDHDDYIGSLLSHTRIRHADLALAKLLNQQRVDDCLYLILLLLRAE
QQQHSCLSYEEINWADPFSLAMHELEGPLAPWQPHNAGTIWQQLLQHPAVGDGKPLVLFA
DKLYLSRLASYEALLAERFLQMQQQPLKLDENKLIQLLENYFPDTQADHIDWQKVACAMA
ASTGFCVITGGPGTGKTTTVTKLLAILQSLYFEAPLTVKLVAPTGKAAARLSESILGAKA
KLGLDAALSDLIVDHAQTIHRLLGVIPQSNQYRHNQFNPLHLDLLIIDEASMVDLSLLAK
LVQALPAHARLILLGDKDQLASVDTGSVMSDLCQELTLNTQPNYSQKLCDKLNKLCFDKK
PVLNEKQSEFALSDSVAFLQKSHRFNSNSGIGQLALAVNNNDRPLLSQTLQKGYQDITVL
GLNNEQYLALIERAADNYSNYLELMHEGRDAQEIHYAFSQYQLLAALREGPYGVEQLNKR
IEQVLYARQLIAPTSRHYAGQPIMVIENDYQLKLFNGDIGILLLDEQQQLKATFIDEQGS
FRSFYPARLPRHENVYAMTIHKSQGSEFAHTAMILPPIQRASVGINRQLVYTGITRAKKH
FELVAQEQVIFNAMQKSVSRSSGLRDRLMKN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttagatttatttgccgatatccaagaggctgtatttgatcacgatgactat
attggctcattgttgtcgcacacgcgcattcgccatgctgatcttgcgttagccaaatta
ttgaatcagcagagggtagatgactgcttatatttgatattgctattgcttcgtgctgaa
cagcaacagcatagctgcctatcttacgaggaaattaactgggctgatcctttctcattg
gctatgcatgagttggaaggccctttagcaccttggcagcctcacaatgctggcacaata
tggcagcagttattgcaacacccagcagtgggtgatggcaaaccattggtactgtttgcc
gataagttgtatttatcccgcttagccagttacgaagccttgttagctgagcgttttcta
caaatgcaacaacagcctttaaagctagatgaaaacaagcttatccaattgctagaaaac
tactttcctgacacgcaagctgatcatatagactggcaaaaggtggcatgtgccatggcc
gccagcactggcttttgcgtgataactggcggaccgggtacgggtaaaaccaccaccgta
actaagctattagctattttacaatctttgtattttgaagcgccgctgactgtaaagctg
gtggcaccaacaggtaaagctgcggcaaggttaagtgaatcaattttgggcgctaaagcc
aagttaggattagacgctgcactgagtgatttaattgttgatcatgcacaaacaattcat
cggttactcggtgtgatcccacaaagcaatcagtatcgtcacaaccaatttaatccgtta
catcttgatttgttaattatcgacgaagcttctatggtcgatctctcgctcctagctaaa
cttgtgcaagcattacctgcgcacgcaaggttaattttattgggagataaagaccagttg
gcttctgttgataccggcagtgttatgagtgatttatgccaagagttaacactcaataca
cagcctaattatagccagaaactatgtgataaattaaacaagctatgttttgacaaaaag
ccagtacttaatgaaaagcaaagcgagtttgccttgtctgacagtgttgcgtttttgcaa
aaaagccatcgttttaatagcaacagcggtattggacagctcgccttagctgtgaacaac
aatgataggccgttgcttagtcaaacattgcaaaaaggatatcaagacatcactgtactt
gggttgaataatgagcaatacctcgctttgatagagcgtgcggctgacaattacagtaac
tatctagaattgatgcacgagggtcgcgacgcgcaagaaattcattatgcattttcacag
taccaactacttgctgcattgcgtgagggcccatacggggtagagcaattaaataagcgt
attgagcaggttttatatgctcgacaattaattgctcccaccagccgacattatgcgggt
cagccaatcatggtgatagaaaatgactatcagttaaaactgtttaatggcgatattggg
atactattacttgacgagcagcaacaactaaaagccacctttattgacgaacaaggcagt
tttaggtcgttttatccagctcgtttaccccgtcatgagaatgtttatgctatgaccatc
cacaagtcgcaaggctctgagtttgcgcatactgcaatgatcttaccgccgatacaaaga
gcatcggttggtataaatcgtcagttagtttatacggggatcacacgggctaaaaagcac
tttgagctggtggcccaagaacaagttatattcaatgcaatgcaaaagtcggtatctcgt
agctctggattacgagataggttaatgaaaaattaa
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