Pseudoalteromonas sp. A25: PA25_21970
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Entry
PA25_21970 CDS
T07990
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz02024
Quorum sensing
psaz03060
Protein export
psaz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PA25_21970 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PA25_21970 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PA25_21970 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psaz02044
]
PA25_21970 (ffh)
Enzymes [BR:
psaz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PA25_21970 (ffh)
Secretion system [BR:
psaz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PA25_21970 (ffh)
Eukaryotic Sec-SRP protein
PA25_21970 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
cobW
YqeC
AAA_33
AAA_24
AAA_30
AAA_26
APS_kinase
AAA_31
ATP_bind_1
AAA_14
ABC_tran
T2SSE
KTI12
TsaE
AAA_16
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
BBN82212
UniProt:
A0A5H2YBW2
LinkDB
All DBs
Position
1:complement(2617215..2618594)
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AA seq
459 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVREFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGESNEELNLAAQPPAVVMMAGLQGAGKTTSIGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLASEVDVEFFPSDISQKPVDIATNAISHAK
KKFIDVVLVDTAGRLHVDSDMMDEIKALHGAINPIETLFVVDSMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFIGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKDKAAKVAEKVFKGDGFTLEDFAEQLRQMKNMGGMMSMLEKLPGMNNL
PDAVKGQVGDKTFNQMEAIISSMTPKERARPEIIKGSRKKRIAAGSGTQVQDINKLLKQF
TQMQKMMKKMKGKGGMQKMMRGMKGMLPPGMMGGGGPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaacgtttaggtaaaacgctaaaaaacatcagcggccgaggc
cgcctaaccgaagataatattaaagaaactctgcgcgaagtacgtatggcgctgcttgag
gccgatgtcgcgttacctgtggttcgtgagtttgttaaacaagtaaaagagcgcgcggtt
ggcgtagaggtcaccaaaagtttaagcccgggtcaggtattcattaaaattgttcgcgaa
gagcttgaaaaagccatgggcgaatcgaatgaagagctaaacctagcggcgcagccacct
gcggttgtgatgatggcgggtctgcaaggtgcgggtaaaaccaccagtatcggtaaattg
gctaagtttttaaaagagcgcaaaaagaagtctgtgcttgtggtcagtgccgacgtatat
cgccccgcagcaattaaacagctagaaacattggccagcgaagtagatgtcgagtttttc
cccagtgatatttcacaaaagcctgtagatattgccaccaatgcaattagccacgccaag
aaaaagtttatcgatgttgtgcttgttgatactgcaggtcgtctgcacgtagacagcgat
atgatggatgagattaaagcactgcacggtgctattaatccaatagaaacgctgtttgtt
gtagactcgatgacaggtcaagatgcggcaaatactgctaaagcctttgatgaagcgctg
ccactgaccggtgtgatcttgaccaaaaccgatggtgatgcccgtggtggtgcggcgttg
tcaattcgtcatattactggcaaaccaattaaatttattggtgtgggtgagcgcacagac
gcgctagagccattccacccagaccgtattgcatctcgaattttgggaatgggtgacgta
ttgtcgcttatcgaagaagttgagatgaaggttgataaagataaagcggccaaagtagct
gaaaaggtatttaaaggcgacggctttaccctagaagactttgctgagcagttacgccaa
atgaaaaacatgggcggcatgatgtcgatgttggaaaagctgccgggtatgaataactta
ccagatgcggtaaaaggtcaggttggagataaaacctttaaccagatggaagccatcatc
agctcaatgacgccaaaagagcgtgctcgtcctgaaataatcaaaggctcacgcaaaaag
cgtattgcggcaggctctggcactcaagtgcaagatatcaacaagctgcttaagcaattt
acgcaaatgcaaaagatgatgaaaaagatgaaaggcaaaggcggcatgcaaaaaatgatg
cgcggcatgaaaggcatgttaccgccaggcatgatgggcggcggtggcccgaagttttaa
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