Pseudoalteromonas sp. A25: PA25_22990
Help
Entry
PA25_22990 CDS
T07990
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PA25_22990 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_22990 (uvrB)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA25_22990 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PA25_22990 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
DUF87
UB2H
AAA_5
AAA_30
Kinesin
Cas3-like_C_2
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBN82314
LinkDB
All DBs
Position
1:complement(2741993..2744002)
Genome browser
AA seq
669 aa
AA seq
DB search
MSDEFKLVSQFSPSGDQPTAIAQLCEGLEAGLAHQTLLGATGTGKTFTMANIISNLNRPT
IIMAHNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMKMMLLLKVGNTVDQRDMLRRLAELQ
YTRNDMDFSRGTYRVRGEVIDIFPAESDSYAIRVEMFDDEIERISMFDPLTGAVEKHLIR
ATIYPKTHYVTPREKILDAIDRIKVELKERRAQLLENNKLVEEQRVAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRAPGEPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRLPSAMDNRPLKFDEFEAIAPQTIYVSATPGDFELNKSNGDVAEQVIRPTGLLD
PQLEVRPVATQVDDLLSEIYLRVEQKERVLVTTLTKRMAEDLTDYLNDHDVKVRYLHSDI
DTVERMEIIRDLRKGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSARSLIQTIG
RAARHLNGRAILYGDVITKSMRKAIDETERRRAIQQAYNEKHGIEPQALIKKITDVMDTG
EEVSQADIAKAKLHRKPKVAVANSDPKQLAAQISELETKMMQHARELEFEQAAKVRDQIH
ELQQQLLGL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaatttaaactggtatcacagttctcccccagtggcgatcaacctacggca
attgcccagttgtgcgaaggcttagaagccggccttgcgcaccagactttattaggtgca
acgggtacgggtaaaacttttaccatggccaacatcatcagtaacttgaatcgtcccacg
attatcatggcgcataataaaaccttggcggcgcagttgtacggggaaatgaaagagttt
tttcctgataatgctgttgagtattttgtctcgtactacgactactaccagcctgaagct
tatgtggtcgcaagtgatacatttattgagaaagacgcgtcaattaacgaacatatagaa
caaatgcgcttgtcagcaactaaagcattacttgaaagacgcgataccattattgttgcc
tcggtctctgctatttatggccttggcgatccagattcttacatgaagatgatgttattg
cttaaggtgggcaataccgttgaccaaagagacatgttgcgtcgtttggctgaactacag
tatacccgcaatgatatggactttagccgtggcacctatcgcgtgcgtggtgaagtgata
gatatcttcccggcagaatctgactcgtatgccattcgtgtggaaatgtttgatgatgaa
attgaacgtataagtatgtttgatccgcttacaggcgcggtggaaaagcacttaataaga
gccactatctatcctaaaactcactacgttacgccacgagagaagatcctcgatgccatt
gatagaattaaggttgagcttaaagagcgcagagcgcagttacttgaaaataacaaactg
gttgaagagcaacgtgttgctcaacgtacccagtatgatatagaaatgatgaccgagctg
ggttattgctcagggattgaaaactacagtcgttatttatctggccgggcaccgggcgag
ccaccaccaaccttattagattacttacccgatgatgccttgatgatcatcgatgaatca
cacgttactgtctcacaaataggggctatgtataaaggtgataggagccgtaaagaaaac
ctagttgagtatggttttaggttaccctcagcaatggataatcggccattaaagtttgac
gaatttgaagcaatcgcaccacaaactatctatgtatcggcaacacctggtgattttgag
ttaaacaagtccaatggtgatgtagcggagcaggttattcgtccaactggattacttgac
ccacaattagaagtgcgccctgtcgctacgcaggtagatgatttgctctctgaaatttat
ttacgtgtagagcaaaaagagcgagtattggtcacaacgctgaccaaacgcatggcggaa
gatttaaccgactatttgaatgatcacgatgtaaaagtgcgatatttacactctgacatt
gatacggtcgagcgtatggaaattattcgagacttacgtaaaggtgtatttgatgtgcta
gtgggcattaacttacttcgtgaaggtttggatatgccagaagtgtctttggtagcgatt
ttagatgccgataaagaaggctttttacgttcagcacgctcactcattcaaacgattggt
cgcgcggctcgacacctcaatggtagagccattttatatggtgatgtgattactaagtcg
atgcgcaaagccatcgatgaaactgagcgccgccgcgcaattcaacaggcctataacgaa
aagcacggcattgagccgcaagccttaatcaagaagatcaccgatgtgatggataccggt
gaggaagtgtcacaggctgatattgccaaagctaaactacatagaaagccaaaagtggca
gtggctaactctgatcctaaacaactggcagcgcaaattagtgaacttgaaacgaagatg
atgcaacacgctcgtgagttggagttcgagcaggcagcgaaagtacgtgaccaaattcat
gagctacaacagcagttattgggtttgtga
DBGET
integrated database retrieval system
