Pseudoalteromonas sp. A25: PA25_26680
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Entry
PA25_26680 CDS
T07990
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psaz03021
]
PA25_26680 (rpoH)
Transcription machinery [BR:
psaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PA25_26680 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
IF2_N
HTH_25
SANT_DAMP1_like
Sp-DndD
EcoRI
Glyco_hydro_98M
UPF0231
Motif
Other DBs
NCBI-ProteinID:
BBN82683
UniProt:
A0A5H2Y2F0
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All DBs
Position
1:complement(3185150..3186013)
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AA seq
287 aa
AA seq
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MSKDLYALALTAGQQSASLDGYLQTVSAIPMLDAEQEKVLATRLQQEGDLEAAKQLIVSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFNPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQDEVTTVANELGVSEKEVREMESRMSG
QDMGFDLTSDDNDDAPASSYSPVQYLTDASGDLADVVEEEQWQEQSQTRLFNALKTLDER
SQDIISARWLADEKATLQDLAEKYNVSAERVRQLEKSAMKKLQAAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcattagcactaaccgctggacaacaaagcgcaagccttgat
ggctacttacaaactgtaagtgctatacctatgcttgatgctgaacaagaaaaagtgttg
gccacccgtcttcagcaagaaggggatttggaagctgctaaacaactcatcgtttctcac
cttcgctttgttgcccatattgccaaaagttactctggttacggtttaccgcaggctgac
ttaattcaagaaggtaacataggtctgatgaaggctgttaaacgttttaatcctgatgtc
ggtgttagactcgtttcatttgcggtgcactggataaaagccgaaattcatgagtacgtg
ttaaagaactggcgtattgttaaggttgcaaccacaaaagcacagcgtaaactgttcttt
aatttaagaaagaataaaaagcgtttgggctggtttaaccaagacgaagtaaccacagtt
gcaaatgaacttggcgtgagtgaaaaagaagtacgcgaaatggaatcacgtatgagcggc
caagatatgggctttgatttaacatcagacgataacgacgacgcacctgcaagcagctat
tctcctgttcaatacttgactgatgcaagtggtgacttagctgacgtagttgaagaagag
cagtggcaagagcaatcacagactcgtttgtttaatgcccttaaaacgttagatgagcgt
tcacaagatatcatcagtgcgcgttggttagctgatgaaaaagcaacactacaagacctg
gcagaaaagtataatgtgtcagcagagcgtgtacgtcagttagaaaagtcagcaatgaaa
aagttacaagctgcaatgagctaa
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