Pseudoalteromonas sp. A25: PA25_27450
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Entry
PA25_27450 CDS
T07990
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psaz03016
]
PA25_27450 (truD)
Enzymes [BR:
psaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PA25_27450 (truD)
Transfer RNA biogenesis [BR:
psaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PA25_27450 (truD)
Prokaryotic type
PA25_27450 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
IclR_C
Motif
Other DBs
NCBI-ProteinID:
BBN82760
UniProt:
A0A5H2Y3Y1
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All DBs
Position
1:complement(3268396..3269439)
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AA seq
347 aa
AA seq
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MNTLNYLYGQPQSKADFKSSAEDFMVDELLDIPLTGEGEHVCLQIIKKGENTTYVAKQIA
KLANVAPRDVSYAGLKDRHGVCSQWFSVPVAIKKEIDFSALNSDSIFVVKQVRHNRKLRT
GCHSGNHFKLTLRNVDMPLDILSRINAVRQGVPNYFGEQRFGHDGHNLEMAERLFSGEQI
RDKKLRGIVISAARSHIFNQLVSLRVEHHGLAKTWHREVFLLNGSNAFFEDDISDEIIAR
LTSGDILLSAPMVGKGEKGLVAQEREWLQPYSAWQQGLGQLGLKIERRALRLVPNNLQVE
TIDSSTIKLSFSLPKGTFATAVLRELVQHRDASKDNLTREVVDEDLA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctcaattatttatacggccagcctcagtcaaaagctgactttaagtccagt
gctgaagactttatggtggatgagcttttagatattccactgactggagaaggcgagcat
gtttgtcttcagatcattaaaaagggtgaaaataccacctatgtagcaaaacaaatcgcc
aagcttgccaatgttgccccaagggatgtcagttacgcgggtttaaaagaccgtcatggc
gtatgtagtcagtggtttagcgtacctgttgctattaaaaaagagatcgattttagcgca
ctaaacagcgacagtatttttgttgttaaacaagttcgacataaccgaaaattacgcaca
ggttgtcacagtggtaaccattttaagctcaccttgcgtaatgttgatatgccgcttgat
attctttctcggattaacgcagtgcgccagggggttcccaactattttggtgagcaacgg
tttggccatgatgggcacaacttggaaatggctgagcgtttattttcaggtgagcagatc
agagacaaaaagctgcgtggcattgtaatttcagcggcgcgctctcacatttttaatcag
ttggtgagtttacgtgttgagcaccacggtttagctaaaacatggcatcgagaagtgttt
ttgttaaatggcagcaatgccttttttgaagatgatatcagtgatgagatcatcgcacgc
ttaaccagtggtgatattttattatctgcccccatggttggtaagggtgagaaagggtta
gttgcacaagaaagagaatggttacaaccatatagtgcttggcaacaagggcttgggcag
ttaggcttaaagattgaaaggcgggcgttacgcttagtgccaaacaacctacaagtggaa
acaatagacagtagtacgattaaactgtcattcagtttgcccaaaggtacatttgccaca
gccgtgcttagagagctggtacagcatcgagatgccagtaaagacaatttaactcgtgag
gtagttgatgaggatcttgcttag
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