Pseudoalteromonas sp. A25: PA25_28460
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Entry
PA25_28460 CDS
T07990
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psaz01011
]
PA25_28460
Enzymes [BR:
psaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PA25_28460
Peptidoglycan biosynthesis and degradation proteins [BR:
psaz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PA25_28460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
BBN82861
LinkDB
All DBs
Position
1:3391769..3393283
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AA seq
504 aa
AA seq
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MQRYNLNLLLLRLRLFSVIGTCALFLNACATTQPSVENKQDTVAINNSLVSTTVVEQPVN
NETKETEEAPKKISLTKAEKPQITDLWQRISSQLRFIIEPNERLEKRINWYLAQPNYLVS
VSKRAKPYLYHIVKEVERRRLPMELVLLPFVESDFRPKVTSSQQAVGAWQLVNSTAYHFG
ITTDQWYDGRQDVLASTHAALDYLSYLYRRFNGNWLHALAAYNSGEGRVKSAIKRNKRRG
KNTNFWHLSLPKETADYVPKLIALSYLLQTEHPNFKRPNIPNYALTSPLDIGQQFDFSIL
ASLTGVDKALLHKLNPGYLRHQSSPNGPHIVLLPFTEQALYTSSFFQRYFSQTYTVQNND
TLYRLAKRFNTSIETIKLLNNKTSDMIRVGETLKISQAQAFDSLLIDYEISPYVAQVQQP
KQMTMEFHHTIDEGDSLWKISKHYKVSVKDLLVWNKLKPNQVLKPGKVLVLHLPKGNETQ
KKPAPNVFLSDLERLVKPETRSNR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctataatctaaatctgctgctcctaaggttaaggctatttagcgtcataggc
acgtgcgcacttttcctaaacgcctgtgctacaacccaaccttcagtagaaaataagcaa
gacaccgtagccatcaacaactcattggtaagcactactgtagttgagcagcctgtaaat
aacgagactaaagaaactgaagaagctccaaaaaaaataagtttaaccaaagcagagaaa
ccacaaatcactgatctgtggcaaagaataagttcacaattgagatttatcattgaaccc
aacgagcgactcgaaaagcgcatcaattggtatctcgcacagccaaattaccttgtatct
gtgtcaaaacgtgccaaaccttacctttatcatatcgtcaaagaggttgagcgacgtcgc
ctgcctatggagttagtgttactgccatttgtagaaagtgattttaggcccaaagtgact
tcatctcagcaagccgtgggcgcttggcaacttgtgaactcaacagcttatcattttggt
atcacaaccgatcagtggtatgacggacgacaagatgtgttggcttcaacacatgcagcc
ttagattatttgagttacttgtacagacgctttaacggtaactggttacatgcattagct
gcatataatagtggcgaaggacgtgtaaagagtgcgataaaaagaaacaagcgtcgcggt
aaaaacaccaacttttggcatttatcgttacccaaggaaaccgccgattatgtaccaaag
ttaattgcgctgagttatctattacaaactgaacacccaaactttaaacgaccaaacata
ccaaattatgcgctaacaagcccattagatattggtcagcaatttgatttttcaattttg
gcatcgttaacaggtgtcgacaaagcattattgcataaactcaaccccggctacctgcgc
catcaaagctccccaaatgggccacatatcgtgttacttccctttacagagcaggcacta
tacacaagtagctttttccaacgttattttagccaaacttatacggtacaaaacaacgac
accctttatcgcctagcaaagcgcttcaacacatctattgagacgattaaactgttaaac
aacaaaaccagtgatatgatccgcgttggcgaaacattgaaaataagccaagcacaggcc
tttgacagcctccttattgactacgaaataagcccctatgtcgcacaggtacaacaacct
aaacaaatgaccatggagtttcaccatacgattgatgaaggtgattcactgtggaaaata
agtaagcattacaaagtatcagtaaaagacctgctagtgtggaacaaactcaaacccaac
caagtattgaagccaggcaaagtgctcgttttacatttgccaaaagggaatgaaacacag
aaaaaacctgctccaaacgtctttctatcggacttagaacggctagtaaagccagaaact
cgttctaaccgctag
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