Pseudoalteromonas sp. A25: PA25_29410
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Entry
PA25_29410 CDS
T07990
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA25_29410 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psaz03019
]
PA25_29410 (groL1)
03110 Chaperones and folding catalysts [BR:
psaz03110
]
PA25_29410 (groL1)
03029 Mitochondrial biogenesis [BR:
psaz03029
]
PA25_29410 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psaz04147
]
PA25_29410 (groL1)
Enzymes [BR:
psaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PA25_29410 (groL1)
Messenger RNA biogenesis [BR:
psaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PA25_29410 (groL1)
Chaperones and folding catalysts [BR:
psaz03110
]
Heat shock proteins
HSP60 / Chaperonin
PA25_29410 (groL1)
Mitochondrial biogenesis [BR:
psaz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PA25_29410 (groL1)
Exosome [BR:
psaz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PA25_29410 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
PA25_29410 (groL1)
Exosomal proteins of breast cancer cells
PA25_29410 (groL1)
Exosomal proteins of colorectal cancer cells
PA25_29410 (groL1)
Exosomal proteins of bladder cancer cells
PA25_29410 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBN82956
LinkDB
All DBs
Position
1:complement(3501663..3503309)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVLFANDARTKMLAGVNILANAVRVTLGPKGRNVVLDKSFGAPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSVPCADTKAIAQVGTISANSDLEIGEIIANAMEKVGRESGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINNAEKGAVELDNPHILLVDKKISNIRELLPTLEA
VAKTSKPLLIIAEDLEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGT
VISEEIGLELEKSTIEDLGTAKRVVITKDDTTIIDGAGEQEGIDGRVAQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRVANKLVDLLGDNEDQNHGIKVALRAMEAPLRQIVSNAGDEASVVVNNVKAGEGNYGYN
AANGEYNDMIEMGILDPTKVTRSALQYAASVAGLMITTEAMVAELPKDEPAAPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagttttatttgcaaatgatgctcgcactaagatgctagcgggtgta
aacattttagcaaacgcagtacgtgtaacgcttggccctaaaggtcgtaacgtagtttta
gacaaatcatttggcgcaccagtgatcaccaaagatggtgtatctgtagcaaaagaaatt
gagcttgaagacaagttcgagaacatgggcgcacaaatggttaaagaagttgcatctaaa
gcgaacgatgcagcgggtgacggtacaacgacagcaacagtacttgcacaatctatcgta
aatgaaggcttaaaagcggttgcagcgggtatgaacccgatggaccttaagcgtggtatc
gacaaagcagtaatcgcagcagttgctgaacttaaagcgctttcagtaccatgtgctgac
accaaagcaatcgcacaagtaggtactatctctgctaactctgatttagaaatcggtgag
atcattgctaatgcaatggaaaaagtaggccgtgagtcaggcgtaattacggttgaagaa
ggtcagtcgttagaaaacgaactagacgttgttgagggtatgcagtttgaccgcggttac
ctatcaccttatttcatcaacaacgctgaaaaaggtgcggttgagctagataacccacat
atcctattagtagataagaaaatctctaacatccgtgaacttctgcctacattagaagcg
gttgctaaaaccagcaagccactactaatcattgcagaagaccttgaaggtgaagcactt
gcgacacttgttgtaaacaacatgcgtggcattgtaaaagtagctgcggttaaagcacct
ggttttggcgaccgtcgtaaagcaatgctacaagacatcgctatcctaactggtggtaca
gttatctctgaagagattggcctagagcttgagaaatcaacaattgaagacttaggtaca
gctaagcgcgttgtgatcactaaagacgacacaacgatcatcgatggtgctggcgagcaa
gaaggcattgatggccgtgttgcacaaattaaagcacaaatcgaagaagcaacttcagac
tacgacaaagagaaactacaagagcgcatggcaaaacttgctggtggtgttgcagtaatc
aaagttggcgcagcaactgaagttgaaatgaaagagaaaaaagaccgcgtagaagatgca
ttacacgcaactcgcgctgcggttgaagaaggcgtagtaccaggtggtggtgttgcacta
gtacgtgtagcgaacaaacttgttgacctattaggtgacaacgaagaccaaaaccacggt
attaaagtagcacttcgtgcaatggaagcgcctcttcgtcaaatcgtatcaaatgcgggt
gacgaagcatcagtagttgtaaacaacgttaaagcaggcgaaggtaactatggttacaac
gcggcaaacggtgaatacaacgacatgattgaaatggggatccttgacccaactaaagta
acgcgttctgcactacagtacgcagcatcagtagcaggtcttatgatcactactgaagca
atggttgctgaactacctaaagatgagccagctgcaccagatatgggcggtatgggcggc
atgggtggaatgggtggcatgatgtaa
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