KEGG   Pseudoalteromonas sp. A25: PA25_30670
Entry
PA25_30670        CDS       T07990                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psaz  Pseudoalteromonas sp. A25
Pathway
psaz03030  DNA replication
psaz03410  Base excision repair
psaz03420  Nucleotide excision repair
psaz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PA25_30670 (polA)
   03410 Base excision repair
    PA25_30670 (polA)
   03420 Nucleotide excision repair
    PA25_30670 (polA)
   03440 Homologous recombination
    PA25_30670 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psaz03032]
    PA25_30670 (polA)
   03400 DNA repair and recombination proteins [BR:psaz03400]
    PA25_30670 (polA)
Enzymes [BR:psaz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PA25_30670 (polA)
DNA replication proteins [BR:psaz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PA25_30670 (polA)
DNA repair and recombination proteins [BR:psaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PA25_30670 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PA25_30670 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: BBN83082
UniProt: A0A5H2YDR2
LinkDB
Position
1:complement(3669266..3672031)
AA seq 921 aa
MSSIPENPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVVNMLKSLLKQYQPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIKPIHDIIEAMGLPLVSISGVEADDVIGT
FARIASEQKRHVLISTGDKDMAQLVNEHVTLINTMTNTVLDPNGVVEKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGIGSIDSLYERLDDIAGLGFRGSKTMAKKLEEHK
EQLVLSYELATIKLDVDVEQDLEQFAIGEVNKDKLIELYAECEFKRWLSELLDGATAKAT
ADITDIESQSSAPAINQVEAHYETILTEAQLDNWIAKLRSSNLMAFDTETTSLDYMQADL
VGMSFAVEPGEAAYLPIAHDYVGAPEQLSKALVFEKIGAVLADPAVKKVGQNLKYDKSVL
ARAGLELNGIAFDTMLESYVFNSVGTRHDMDSLALKFLGHKNISFEDIAGKGKSQLTFNQ
IELEKAAPYAAEDADITLRLHQHLWPLLQQHEELLTVFNDIELPLLAVLSEIERTGVKID
SDMLAKQSVELTKRLAEIEKEAFELAGEEFNLSSPKQLQVILFEKQGLPVIKKTPKGAPS
TAEEVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPKLVNPVTGRVHTSYHQAVTATGR
LSSSDPNLQNIPIRNEAGRRIRQAFIADEGKQILAADYSQIELRIMAHLSQDQGLLSAFA
QGKDVHSATASEVFSVPLDDVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRHEAQHYM
DKYFERFPGVLEYMERTREEAGEKGYVETLFGRRLHLPDIKARNGARRKAAERAAINAPM
QGTAADIIKKAMLKVSDWLHTQSSDDIKLLMQVHDELVFEVAADKVAQFSEIICELMSQA
ATLDVPLLVEADYGENWEQAH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgtcttcgatccctgaaaatcccttgatcttggttgatggttcttcttatctttttcgt
gcctatcatgcgccaccccaccttaccaattcaaaaggtgaagccacgggggccatttat
ggcgtggtaaacatgctaaaaagtttgttaaagcagtatcagcctagtcacatggtagtg
gtgtttgacgcgaaagggccaacttttcgaaacgaaatgtacagtgagtacaaagcacat
cgaccaccgatgccagacgatctgcgcactcagatcaaaccgatccacgacattattgaa
gcgatgggcctaccacttgttagtatcagcggggtagaagctgacgatgttattggtaca
tttgcgcgtattgcatcagagcaaaagcgtcatgttttaatcagtaccggtgataaagat
atggcgcagttggtgaatgaacatgtcacgttgatcaatactatgacgaatacagtgctt
gaccccaatggcgtggttgaaaagtttggtattggtccagagcttattattgactactta
gctttgatgggcgacaaggtggataatattcccggcgtaccaggtgtaggtgaaaaaacc
gcactggctatgctgcagggaattggctcaatagactcactctatgaacgtcttgatgat
attgcaggtttgggttttagaggctctaaaacaatggctaaaaaactcgaagaacacaaa
gagcaacttgtgttgtcttatgagctagccactatcaaattagatgttgatgttgaacaa
gatttagaacagttcgccattggtgaagtgaacaaagacaagctaattgagctttacgca
gaatgtgaatttaagcgttggctaagtgaattgctcgatggtgcaacagctaaagcaaca
gctgatattacagatatagagagtcaaagtagtgcaccagcgattaatcaggtggaggcg
cactatgaaacgattttaaccgaagcgcaacttgataactggatcgcaaagttacgttcg
tcaaatttgatggcatttgatactgaaaccacgagtcttgattatatgcaagctgatttg
gtcggtatgagctttgccgtcgagccaggagaagcggcttatcttcctattgcccacgat
tatgtgggtgctcctgagcaactttcaaaagcgctagtatttgaaaaaataggggccgta
ttggccgaccctgcggtgaaaaaggtgggtcagaaccttaaatatgacaaaagtgtctta
gcgcgtgcaggtttggaattaaatggcattgcgtttgatactatgctcgagtcttatgta
tttaacagtgtaggcacgcgtcatgatatggactctttggcacttaaatttttagggcac
aaaaatatcagctttgaagatattgcaggtaaaggtaaaagccaactgacatttaaccaa
attgagttagaaaaagcagcaccttatgcagctgaagatgcagatattactttgcgtttg
catcaacatttatggccgcttttacaacagcatgaagagttattaacggttttcaatgat
attgaattacccctactcgctgttctttcagagatagagcgcaccggtgttaaaatcgat
tctgacatgcttgccaaacagagcgttgaattaactaaacgtttagcagagatagaaaaa
gaagcatttgagctggcgggagaagagttcaatttgagctcaccaaaacagttacaggta
atattgtttgaaaagcagggcttacctgttatcaagaaaacgcccaagggagcgccttct
acggctgaagaagtactgcaagaattggcacatgattaccctttacctaagctcattata
gagcatcgagggttagcaaagctcaagtcaacctatacagacaagttaccaaaattggtt
aaccctgtaaccggacgtgttcatacttcatatcatcaagctgtgacggccactgggcga
cttagctcaagtgatcctaatttgcaaaacattccgatccgtaatgaagctggtcgtcgt
atccgtcaagcgtttatagcggatgaaggtaagcaaattctggctgccgattatagccaa
attgagctgcgtattatggcgcatctgtctcaagatcaagggctacttagtgcgtttgca
caaggcaaagatgtgcacagtgcaacagcatcagaggtattctctgtgccgcttgatgat
gttacctctgatatgcgtcgtaaagcgaaagcagtaaactttggtcttatttacggcatg
agcgcatttggcttgtctagacagcttgatattccgcgtcatgaggcgcaacattatatg
gataagtacttcgagcgcttccccggtgtattggaatatatggagcgtactcgtgaagag
gccggtgagaaaggttatgtggaaacgttatttggacgtcgactacatttaccagatatt
aaagcgcgtaatggtgcacgtcgcaaagcggccgaacgtgcggctatcaatgcgccgatg
caaggaactgctgctgatatcatcaaaaaagcaatgcttaaggtaagtgactggttacat
acccaatctagtgacgatattaagttattgatgcaggtgcacgatgaattggtatttgaa
gtggctgcggacaaagtggcgcaattcagtgaaataatttgtgaactgatgagccaagca
gcaacgttggatgtgcctttattggttgaagcagactatggcgaaaactgggaacaggcc
cattga

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