Pseudoalteromonas sp. A25: PA25_30670
Help
Entry
PA25_30670 CDS
T07990
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03030
DNA replication
psaz03410
Base excision repair
psaz03420
Nucleotide excision repair
psaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA25_30670 (polA)
03410 Base excision repair
PA25_30670 (polA)
03420 Nucleotide excision repair
PA25_30670 (polA)
03440 Homologous recombination
PA25_30670 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psaz03032
]
PA25_30670 (polA)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_30670 (polA)
Enzymes [BR:
psaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PA25_30670 (polA)
DNA replication proteins [BR:
psaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PA25_30670 (polA)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PA25_30670 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA25_30670 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBN83082
UniProt:
A0A5H2YDR2
LinkDB
All DBs
Position
1:complement(3669266..3672031)
Genome browser
AA seq
921 aa
AA seq
DB search
MSSIPENPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVVNMLKSLLKQYQPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIKPIHDIIEAMGLPLVSISGVEADDVIGT
FARIASEQKRHVLISTGDKDMAQLVNEHVTLINTMTNTVLDPNGVVEKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGIGSIDSLYERLDDIAGLGFRGSKTMAKKLEEHK
EQLVLSYELATIKLDVDVEQDLEQFAIGEVNKDKLIELYAECEFKRWLSELLDGATAKAT
ADITDIESQSSAPAINQVEAHYETILTEAQLDNWIAKLRSSNLMAFDTETTSLDYMQADL
VGMSFAVEPGEAAYLPIAHDYVGAPEQLSKALVFEKIGAVLADPAVKKVGQNLKYDKSVL
ARAGLELNGIAFDTMLESYVFNSVGTRHDMDSLALKFLGHKNISFEDIAGKGKSQLTFNQ
IELEKAAPYAAEDADITLRLHQHLWPLLQQHEELLTVFNDIELPLLAVLSEIERTGVKID
SDMLAKQSVELTKRLAEIEKEAFELAGEEFNLSSPKQLQVILFEKQGLPVIKKTPKGAPS
TAEEVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPKLVNPVTGRVHTSYHQAVTATGR
LSSSDPNLQNIPIRNEAGRRIRQAFIADEGKQILAADYSQIELRIMAHLSQDQGLLSAFA
QGKDVHSATASEVFSVPLDDVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRHEAQHYM
DKYFERFPGVLEYMERTREEAGEKGYVETLFGRRLHLPDIKARNGARRKAAERAAINAPM
QGTAADIIKKAMLKVSDWLHTQSSDDIKLLMQVHDELVFEVAADKVAQFSEIICELMSQA
ATLDVPLLVEADYGENWEQAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgatccctgaaaatcccttgatcttggttgatggttcttcttatctttttcgt
gcctatcatgcgccaccccaccttaccaattcaaaaggtgaagccacgggggccatttat
ggcgtggtaaacatgctaaaaagtttgttaaagcagtatcagcctagtcacatggtagtg
gtgtttgacgcgaaagggccaacttttcgaaacgaaatgtacagtgagtacaaagcacat
cgaccaccgatgccagacgatctgcgcactcagatcaaaccgatccacgacattattgaa
gcgatgggcctaccacttgttagtatcagcggggtagaagctgacgatgttattggtaca
tttgcgcgtattgcatcagagcaaaagcgtcatgttttaatcagtaccggtgataaagat
atggcgcagttggtgaatgaacatgtcacgttgatcaatactatgacgaatacagtgctt
gaccccaatggcgtggttgaaaagtttggtattggtccagagcttattattgactactta
gctttgatgggcgacaaggtggataatattcccggcgtaccaggtgtaggtgaaaaaacc
gcactggctatgctgcagggaattggctcaatagactcactctatgaacgtcttgatgat
attgcaggtttgggttttagaggctctaaaacaatggctaaaaaactcgaagaacacaaa
gagcaacttgtgttgtcttatgagctagccactatcaaattagatgttgatgttgaacaa
gatttagaacagttcgccattggtgaagtgaacaaagacaagctaattgagctttacgca
gaatgtgaatttaagcgttggctaagtgaattgctcgatggtgcaacagctaaagcaaca
gctgatattacagatatagagagtcaaagtagtgcaccagcgattaatcaggtggaggcg
cactatgaaacgattttaaccgaagcgcaacttgataactggatcgcaaagttacgttcg
tcaaatttgatggcatttgatactgaaaccacgagtcttgattatatgcaagctgatttg
gtcggtatgagctttgccgtcgagccaggagaagcggcttatcttcctattgcccacgat
tatgtgggtgctcctgagcaactttcaaaagcgctagtatttgaaaaaataggggccgta
ttggccgaccctgcggtgaaaaaggtgggtcagaaccttaaatatgacaaaagtgtctta
gcgcgtgcaggtttggaattaaatggcattgcgtttgatactatgctcgagtcttatgta
tttaacagtgtaggcacgcgtcatgatatggactctttggcacttaaatttttagggcac
aaaaatatcagctttgaagatattgcaggtaaaggtaaaagccaactgacatttaaccaa
attgagttagaaaaagcagcaccttatgcagctgaagatgcagatattactttgcgtttg
catcaacatttatggccgcttttacaacagcatgaagagttattaacggttttcaatgat
attgaattacccctactcgctgttctttcagagatagagcgcaccggtgttaaaatcgat
tctgacatgcttgccaaacagagcgttgaattaactaaacgtttagcagagatagaaaaa
gaagcatttgagctggcgggagaagagttcaatttgagctcaccaaaacagttacaggta
atattgtttgaaaagcagggcttacctgttatcaagaaaacgcccaagggagcgccttct
acggctgaagaagtactgcaagaattggcacatgattaccctttacctaagctcattata
gagcatcgagggttagcaaagctcaagtcaacctatacagacaagttaccaaaattggtt
aaccctgtaaccggacgtgttcatacttcatatcatcaagctgtgacggccactgggcga
cttagctcaagtgatcctaatttgcaaaacattccgatccgtaatgaagctggtcgtcgt
atccgtcaagcgtttatagcggatgaaggtaagcaaattctggctgccgattatagccaa
attgagctgcgtattatggcgcatctgtctcaagatcaagggctacttagtgcgtttgca
caaggcaaagatgtgcacagtgcaacagcatcagaggtattctctgtgccgcttgatgat
gttacctctgatatgcgtcgtaaagcgaaagcagtaaactttggtcttatttacggcatg
agcgcatttggcttgtctagacagcttgatattccgcgtcatgaggcgcaacattatatg
gataagtacttcgagcgcttccccggtgtattggaatatatggagcgtactcgtgaagag
gccggtgagaaaggttatgtggaaacgttatttggacgtcgactacatttaccagatatt
aaagcgcgtaatggtgcacgtcgcaaagcggccgaacgtgcggctatcaatgcgccgatg
caaggaactgctgctgatatcatcaaaaaagcaatgcttaaggtaagtgactggttacat
acccaatctagtgacgatattaagttattgatgcaggtgcacgatgaattggtatttgaa
gtggctgcggacaaagtggcgcaattcagtgaaataatttgtgaactgatgagccaagca
gcaacgttggatgtgcctttattggttgaagcagactatggcgaaaactgggaacaggcc
cattga
DBGET
integrated database retrieval system