Pseudoalteromonas sp. A25: PA25_34470
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Entry
PA25_34470 CDS
T07990
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PA25_34470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psaz03000
]
PA25_34470
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_34470
Enzymes [BR:
psaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PA25_34470
Transcription factors [BR:
psaz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PA25_34470
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PA25_34470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HTH_3
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BBN83462
UniProt:
A0A5H2YEJ3
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All DBs
Position
2:complement(235379..236743)
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AA seq
454 aa
AA seq
DB search
MLSAAICQKARESRDHRFDGLFYVAVKTTGIYCRPICPAPAAKEGNVEYFQYAHNAADAG
FRPCIRCRPDAAPGSYAWLGIQTTAVRAKKMIDEGELSTHTTAQLAERLGITQRYLNKLF
KQFYGTSPKQYALYRQCDFAKQLLQQTTMSIADIAFASGFNSLRRFNDAFVRLYQLSPSQ
LRHKKAQSQSHITLFLPFRPPYNWHALHEFLSKRLIEPVEWLTANSYGRTYCLGDYDGSF
EVEFEPSNHRFRVKISINDVAGLHLIVGNIKRVLDLDSDPTFIEAHLKRVLPETFKLTEG
LRLPGLWCEFEAGVRAILGQQVSVSAARNLLKTLVSELGEGNHLGQRLFPKPAAMKDNGF
SFFKMPARRKEALASFATYYSKKSDSLDLDKWLCIKGVGPWTVDYAKMRGQSNPDIYLAG
DLGIKKAFAQHGELEVQACAPFRSYLTFQLWQQL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtgccgctatctgccaaaaagcccgtgaaagtcgcgaccatagatttgatggt
ttgttttatgttgcggttaaaacaacaggcatctattgccgtccgatttgtcctgcgccc
gcggcaaaagaaggtaatgttgagtattttcaatatgctcataatgccgctgatgcaggc
tttcgaccatgtattcgttgtcgacctgacgcagcccccggtagttatgcatggcttggt
atccaaacaacggcggttagagcgaaaaagatgattgatgagggtgaactatcaacacat
acgacagcccaattagctgagcgtttgggtattacgcaacgatatttaaataagttgttt
aagcagttttacggtacgagcccgaagcaatatgcgctttatagacaatgtgacttcgct
aaacagttgttgcaacaaaccacgatgtcaattgcagacattgcctttgcaagtggcttt
aattcattacgccgttttaatgacgcttttgtaaggttatatcaactatcaccaagtcaa
ttacggcacaaaaaagcgcagtcgcagtcgcacataaccttattcttgccttttagacct
ccatataattggcatgctttacatgaatttttatcaaaaagattgattgagccggttgaa
tggttaacagcgaatagttatgggcgtacctattgtttaggtgattacgatggctctttt
gaagttgagtttgaaccaagcaatcataggtttagagtaaaaatttcgattaatgatgtg
gctggattgcacctgatagtcggtaatataaaacgagtgttagatttggattcggatcct
acatttatagaagcacacttaaagcgggtattaccagaaacttttaagttaacagaaggt
ttgcgtttgccgggtctttggtgtgaatttgaagcaggagtgcgtgccattttagggcaa
caagtgagtgttagtgcagcgagaaatttacttaaaactcttgtgagtgagttgggagag
ggaaatcatctaggccaacgactgtttccaaaaccagccgctatgaaagacaacgggttt
tcgttttttaagatgccagcacggcgtaaggaagcattagcaagttttgcgacatactac
agtaaaaaaagtgacagtcttgatttagataaatggttgtgtattaaaggggtggggcca
tggaccgttgattatgccaagatgcgaggacaaagtaaccccgatatttatcttgcagga
gatctaggcataaagaaagcatttgcgcagcatggtgaattggaagtacaagcttgtgcg
ccatttcgcagttacttaacttttcaactttggcaacaattatga
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