Pseudoalteromonas sp. A25: PA25_39340
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Entry
PA25_39340 CDS
T07990
Symbol
ydiJ
Name
(GenBank) FAD-binding oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz00310
Lysine degradation
psaz01100
Metabolic pathways
psaz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PA25_39340 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_2
Fer4_7
Fer4_4
Fer4_18
BBE
Fer4_21
CCG
Fer4
Fer4_20
Fer4_16
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
BBN83949
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Position
2:832142..835189
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AA seq
1015 aa
AA seq
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MIANISQQDTANELLNDYLSTIKQAGFLGETDTSYATRLVNSTDNSIYQNVPQAVIFPRT
NKDIQTALQCASQDPFLSLSFGPRGGGTGTNGQSLTPGIVIDLSRHMREIIEINVEEKWV
KVQAGVIKDQLNDFLKPYGFFFSPDLSTSNRATIGGMINTDASGQGSLVYGKTSDHVLGL
TTYLVDGTELNTSKIATEKAHLIAQQDNRTAQIYKQVLASCEQNRDLILEKFPRLNRFLT
GYDLENVFDSDLKNFDLSRVITGSEGSLGVVAEAKLNITPIAPYKTLINIKYDSFDSALR
NSPFLVQAQATSVETVDSKVLNLAREDIIWHSVSDLITDVPGIDMQGLNMVEFNGETADE
MDDKINALCQKLDQLISNKEAGVIGYQLTNNKDDILKIYAMRKKSVGLLGNTKGKQKPLA
FAEDTAVPPENLADYIGEFRQLLDSHGLHYGMFGHVDAGVLHVRPALDMCDPEQEKLLRK
ISDQVVALTAKYGGLMWGEHGKGYRSEYGPEFFGEKLFTELRKIKAVFDKDNRLNPGKIC
TPIESEDSLVSVDDQKRAWFDKRIDITVRDSFENAMNCNGNGLCFNYDESSPMCPSYKVT
KDRRHSPKGRASLIREWLRLQEESGTDLLESEKQLIHKENSITWWERFRHTRDKRKGTYD
FSHEVKHSMDECLACKACTTACPIKVDVPSFRARFLNLYHSRYNRPLKDYLVANIETMAP
ILSKAASIVNPIVSNKVVSGVIEKVFGYVDTPQLSVPSLQARLKSEFNFDESKLAKMSEQ
DRANCVFIVQDPFTSYYEAELVASLVDVIQALGKSPILLPFVPNGKAQHVKGFLKEFAKT
AKRANQFLSGLAEYKIPMIGVDASLVMVYRDEYKQILNTDKLSFHVDLAHEWLKDQDWSK
IVLNVKPGEEYTLLSHCTETTALPNAANVWKTIFSQLGLNLQTPATGCCGMAGTYGHEVQ
NQENSRALYEMSWQNHVKATERSKLLATGFSCRSQVKRYEDLKPMHPLEFIARSI
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgattgccaatataagtcagcaagatacagccaacgaactacttaacgactatttatct
acgataaagcaagcaggctttttgggtgaaaccgacaccagctatgctacgcgtttagtg
aattcaaccgacaacagcatttatcagaatgttccgcaagcggttatttttcctagaacc
aataaagacattcaaactgcgctgcaatgcgcatcacaagatccatttctttcactatcg
ttcggcccacgcggcggggggactggaacaaatggtcagtcgctaactcctgggattgtt
atcgacttatctcgtcatatgcgagaaatcattgagataaacgtggaagaaaaatgggtt
aaagtgcaggctggtgtaataaaggaccagcttaatgactttttaaaaccttatggcttt
ttcttctcgcctgatctgtcgaccagcaaccgggcaaccattggtggcatgataaacaca
gacgcttcagggcaaggttcgcttgtctatggcaaaaccagtgatcatgtattagggctt
accacttacttagtcgatggtactgagttaaataccagtaaaattgccactgaaaaggca
catctaattgcccaacaagataatcgcactgcgcaaatttacaagcaagtattggcttct
tgtgaacaaaacagagatctaattctagaaaaatttccgcgtttaaaccgttttttgacc
ggctacgacctagagaatgtctttgattcagaccttaaaaactttgatttgtcgagggtt
ataaccggctcggaaggttcgcttggtgttgttgctgaagccaagctaaatataacacct
atcgcgccgtacaaaacgcttatcaatataaaatatgatagttttgattcagcacttcgt
aactcaccttttttggtccaagcgcaagctacctctgttgaaaccgtcgatagcaaagtt
cttaatctggctcgtgaggatataatttggcactcagtatcggacttaattactgatgta
ccaggtatcgatatgcaaggcctaaatatggtcgagtttaatggtgaaactgctgatgaa
atggatgacaagataaacgcgctttgccaaaaactcgatcaactaattagcaataaagaa
gcgggtgtaattgggtatcaactgactaataataaagatgacatccttaaaatctatgcc
atgcgtaaaaagtctgttggtttgttgggcaacacaaaaggtaaacaaaaaccattagct
tttgctgaagacactgcagttccccctgaaaaccttgctgattatattggagagtttcgt
cagcttttagatagccacgggttacattacggtatgtttgggcatgtcgatgcgggtgtt
ttgcatgtgcgtccagcgttagatatgtgtgatcctgagcaagaaaagctacttcgcaaa
atctccgatcaagtagttgctttgaccgcaaaatatggcggactaatgtggggtgaacac
ggcaaaggataccgtagtgaatatggccctgagtttttcggagaaaagctgtttactgaa
cttagaaaaataaaagcggtatttgacaaagataatcgactcaaccccggtaaaatatgt
acaccaattgaaagtgaagactcacttgtaagtgttgacgatcaaaaaagagcctggttt
gataagcgaattgatataacagtgcgtgatagttttgaaaatgcgatgaactgtaatggc
aatggcttgtgttttaactacgatgaatcatctcccatgtgcccatcttataaggtcaca
aaagatcgtcgtcattctccaaaaggcagagccagtttaattcgtgaatggttaaggctt
caagaagagtcgggaactgacttgctggaatctgaaaaacagttaattcataaagagaat
agcattacatggtgggagcgctttagacatactcgagacaaacgtaaaggaacgtatgat
tttagtcacgaagtcaaacactctatggatgaatgtttagcatgtaaagcctgtacaact
gcttgcccgataaaagttgatgtaccaagctttcgcgcgcgctttttaaacttatatcac
agcagatataatcgtccgctaaaagattacttagtggccaacatcgaaactatggcaccc
atactttccaaagcagcgtcaatcgtgaacccgattgtaagcaataaagtagtatccggt
gttatagaaaaagttttcggttatgtcgataccccacaactcagtgtgcccagtttacaa
gcaagattaaaatcagaatttaattttgacgaaagtaagcttgcaaaaatgagtgaacaa
gacagagcgaactgtgtgttcatcgtccaagacccatttacaagttattatgaagcagaa
cttgtagcctcattagtcgatgtgatccaagcattaggtaaaagtccgatattattaccc
tttgtaccaaatggtaaggcacaacatgtaaaaggattcttaaaagagtttgcaaaaaca
gccaaacgggcaaaccagtttttgtctggcttagccgaatataaaataccaatgataggt
gtagatgcatctttggtaatggtataccgcgatgagtataagcaaattctaaacactgat
aagttgagctttcatgtagaccttgctcatgagtggttaaaagatcaagattggtcaaaa
attgtgttaaatgtaaaacctggggaagaatacacactcctttcccactgtactgaaaca
acagcactgcctaatgcagctaatgtatggaagacgattttttctcagcttggattaaac
ctacaaacgcccgcaacagggtgttgtgggatggctggtacatatggacacgaggtacaa
aatcaagaaaattctagagcactttatgaaatgtcatggcaaaatcatgtcaaagcgaca
gagcggagtaagttacttgcaactgggttttcttgtaggagtcaagtcaagcgttatgaa
gatctaaaacctatgcatccattagaatttatcgcacgttctatctag
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