Pseudoalteromonas sp. A25: PA25_39460
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Entry
PA25_39460 CDS
T07990
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psaz03016
]
PA25_39460 (rnz)
Enzymes [BR:
psaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PA25_39460 (rnz)
Transfer RNA biogenesis [BR:
psaz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PA25_39460 (rnz)
Prokaryotic type
PA25_39460 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
NAD_binding_10
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
BBN83961
LinkDB
All DBs
Position
2:845142..846077
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AA seq
311 aa
AA seq
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MQVQFLGTSSGSPSRYRNMSAVAISFDTSKQWMLVDCGEGTQHQILKTPLSPAKLAIICI
THIHGDHCYGLPGLLSSMSLHGRSEPVTLIAPQKLINFIHASLALTDVNLGFDLYCHDVE
ALAGPLQLALCKIESIKLKHRVPSFGYKVTEAQVPKKLKIDQLQANNIESGPHYNTLQKG
HNVDYKGTTLHAHQYTYDSYKPRVVIICGDNEKPTILSEYLNNVDLLVHEATFTHRDLLK
VGTHTGHSDAKRVAEFAQKYGVKRLALTHFSVRYHGPGMLEPLKREALEHYQGDIHFAED
LMCLTIPKQQL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttcaatttttaggcacatcttccggtagccctagtcgctatcgcaatatgtct
gcagttgcaatctcgtttgatacctcaaaacaatggatgctggttgattgtggcgaagga
actcaacatcaaatactcaaaaccccattatcgcccgcaaagcttgcgataatatgcatc
acgcacattcatggtgatcattgctatggtttaccgggcttgttatctagcatgtcatta
catggtagaagtgaacccgttaccttaattgcaccacaaaagctgatcaattttattcac
gcaagccttgcattgactgatgttaatttagggtttgatttatactgccacgatgtcgag
gcattagctggcccattgcaacttgcactgtgcaaaatagaatcgattaaactcaaacac
cgtgtgccaagttttggctataaagtgactgaagcgcaagttcctaaaaagcttaaaatt
gaccaattacaagcaaacaatatcgaaagtgggccgcactacaacacactgcaaaaaggc
cataatgtcgactacaaagggaccacgcttcatgctcatcagtacacttacgatagttac
aagccacgtgttgttattatttgcggcgacaacgaaaaaccgaccatacttagcgaatac
ttaaataatgttgacttgctcgtgcatgaagcaacattcacacaccgagatttactcaaa
gtaggcactcataccggtcactctgatgcaaaaagagtggccgagtttgctcaaaaatat
ggcgtcaaacgattagcattaacgcactttagtgttcgatatcatggcccaggaatgttg
gagcctctcaaaagagaagcgctcgaacattaccaaggcgacatacattttgctgaagac
ttaatgtgtttaactatccctaagcaacagctgtag
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