Pseudomonas syringae pv. syringae B728a: Psyr_0052
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Entry
Psyr_0052 CDS
T00246
Name
(GenBank) ABC transporter
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psb03012
]
Psyr_0052
Translation factors [BR:
psb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Psyr_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
RsgA_GTPase
AAA_29
CT398_CC
MMR_HSR1
AAA_22
AAA_23
MeaB
ATG16
ABC_tran_CTD
DUF815
AAA_16
AAA
AAA_33
KAP_NTPase
AAA_18
AAA_28
RNA_helicase
NACHT
Rad17
TsaE
Mis12
Lumazine_bd_2
Motif
Other DBs
NCBI-ProteinID:
AAY35126
UniProt:
Q500P6
LinkDB
All DBs
Position
complement(52475..54385)
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AA seq
636 aa
AA seq
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MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLL
PADWRIAHMRQEVDTLERLAVDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSA
DGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL
DLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERARAE
RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFNF
VFRESDKISSPLLDLSDARLGYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAG
ELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHLQRLAPTEREQTLRDFLGGFDFR
GARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALTMALQEFGGAV
LVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTRWLADYRLRNAPVSNTPVNADKTD
KKAQRQQAAALRQQLAPHKREADKLERDLGLVNEKLAKVEEALADSTNYEAANKDKLRDL
LAEQAKLKVREAELEDAWMQALELLESMQAELEALS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgattcgacttcaaagccttaccttacagcgtggtccgcaacgtctgctagaagacgcc
gagctgactctgcacgccggccataaagccggtctgatcggtgccaatggcgccggtaaa
tccagcctgtttgccctgctgcgtggagagctgacgccggacgccggcgactgcctgctg
cccgccgactggcgtatcgcgcacatgcgccaggaggtcgacacgctcgaacgcctggcc
gtggattacgtgctcgatggcgacgagcgcctgcgcgaggtacagagctcgctggccgag
gccgaagccgcgcaggacggtgccgctcaggcccgtctgcattcggagctcgacagcgcc
gacggttataccgccgacgcacgcgctcgcaagctgctggccgggctgggcttcaccaac
gaacagatggagcgtcaggtcggcagtttctccggtggctggcgtatgcgcctgaacctg
gcgcaggcattgatgtgcccctcggacctgctgctgctcgacgaaccgaccaaccacttg
gacctcgacgccattctgtggcttgaagactggctcaagagttaccccggcaccttgctg
ctgatttcccacgaccgggattttctggatgccgtggtcgatcacatcgcccatgtcgag
caacgcaggatcactctctatcgcggcggctacagcgccttcgagcgggctcgtgccgaa
cgtctggcccagcagcaacaggcctacgagaagcagcaggcgcaacgtgcgcacatggaa
aagtacatcgcgcgcttcaaggcccaggccaccaaggcccgtcaggcacaaagccggatc
aaggcgctggaacgcatggaagagctgtcggccgcgcacgtcgactctccgttcaacttc
gtcttccgtgagtccgacaagatctccagccccttgctggacctgtccgatgcgcgcctg
ggttacggcgacaagaccatcctcgagaaggtcaagctgcaactcacgcccggtgcacgc
atcggcctgctgggtccgaacggcgcaggcaagtcgacgctgatcaaaaacctcgccggc
gagcttgagccgcaaagcggtcggctggtgcgtggcgaaaacctcaccgtgggctacttc
gcccagcatcagctcgactcactggacgccaaggcgacgccgttgctgcacctgcagcgc
ctggcaccgaccgagcgtgaacagaccttgcgcgatttcctgggcggtttcgacttccgt
ggcgcgcgtctggatgagccggtgctgaatttctccggtggcgagaaagcccgtctggcg
ctggcgctgattgcctgggaaaagcccaatctgttgctgctcgatgaaccgaccaaccac
ctcgacctggagatgcgcctggcgctgaccatggccttgcaggagttcggtggcgcggta
ctggtggtgtctcacgatcggcacttgctcaagagcacgaccgatgacttcctgctggtg
gccgacggccgcgtgcaggcgttcgacggcgatctggatgactacacgcgctggctggcc
gattaccggctgcgcaacgctccggtcagcaacacgcccgtcaacgccgacaagaccgat
aagaaagcccagcgccagcaggcagcggccttgcgtcagcaactggcgccgcacaagcgc
gaagccgacaagctggagcgtgatctcgggctggtgaatgagaaactcgccaaggtcgaa
gaagcgctggctgacagcaccaactacgaggcggccaacaaggacaagctgcgcgatctg
ctggccgaacaggcgaagctgaaagtgcgcgaagccgagctggaagacgcctggatgcaa
gcgctggaactgttggaatcaatgcaggccgaactggaagcattgtcgtga
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