Pseudomonas syringae pv. syringae B728a: Psyr_0270
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Entry
Psyr_0270 CDS
T00246
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03030
DNA replication
psb03410
Base excision repair
psb03420
Nucleotide excision repair
psb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyr_0270
03410 Base excision repair
Psyr_0270
03420 Nucleotide excision repair
Psyr_0270
03440 Homologous recombination
Psyr_0270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psb03032
]
Psyr_0270
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_0270
Enzymes [BR:
psb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyr_0270
DNA replication proteins [BR:
psb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Psyr_0270
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Psyr_0270
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psyr_0270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DnaA_N
Obc1_cap
REF
Motif
Other DBs
NCBI-ProteinID:
AAY35343
UniProt:
Q4ZZS9
LinkDB
All DBs
Position
complement(287690..290455)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLVDGSSYLYRAFHALPPLATSKGLPTGAVKGVLNMLKSLRRQYPDSPLAVVFD
AKGGTFRDALYNDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGIGGGIKELYENLDKVASLPIRGAKTLAAKLEEHREM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQEL
TIEEPTAEAREAAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKIKVGQHAKFAINLLANCAIDGD
QAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQEIAGKGAKQLSFDQ
IALEQAGNYAAEEADLTLRLHEVFDARLAAIPTLQPVLNDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQAS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAF
RNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLYLPDINAKNQSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccactcgtcctggtagacggttcctcctacctctaccgcgccttccac
gcactgccaccactggccacctccaaaggattgccgaccggtgccgtcaagggcgtgctc
aacatgctcaaaagcctgcggcgccagtacccggacagcccgctcgccgtggtgttcgac
gccaagggcgggacgttccgtgatgcgctgtacaacgattacaaagccaaccggccgagc
atgccggacgatctgcgcgtgcaggtcgacctgctgcatgcctgcgtcaaaggcatgggc
tacccgtttctgtgcgtcgaaggcgtcgaagccgatgatgtgatcggcacgctggcacgc
agcagcgcggcggccgatcgtccagtggtgatctccaccggcgacaaggacatggcgcaa
ctggtcgacggccacattactctggtcaacaccatgactggcagcgtgctggatgtggcg
ggcgtgaaagagaaattcggcgtcggtccggagcacatcatcgattacctggcgctgatg
ggcgacaaggtcgacaacattcccggcgtgcccggcgttggcgagaaaaccgcggtcggt
ctgctggtcggcatcggcggtggcatcaaggagctttacgagaacctcgacaaggtcgct
tccctgccgatccgtggcgccaagaccctggccgccaaactcgaagaacatcgtgagatg
gcctttttgtcttacgaactggcgaccatcaagatcgacgtcccgctggacatcgagctg
gatcaattgcattgcggcgagcctgaccgtgacacattgatggagctgtacgccgagctg
gaattcaagagctggatcgaagacctgcaacgcgacgccaagcgcgccggccaggagctg
accatcgaagagccgaccgccgaagccagggaagccgcctatgaagtcattcttgaacag
ggccagttcgatgcctggctgaagaagctgcaggccgcgccgctgtttgccttcgtcacc
cagagcaacggcactgatgcccagcgtgcgcaactggtcggcctgtccttcgccattcag
acccacgaagccgcttacattccgctgacccactcctacatgggcgtgccgcagcaactg
gaccgcgacacggtgctcaaagcgctcaagccgctgctggaagacccggacaaaatcaag
gtcggccagcacgccaagttcgccatcaacctgcttgccaattgcgcgatcgacggcgat
caggctcaaggcatcgacctgcagggcgtccgcttcgacaccattctggaatcctacgta
ctggactccaccgccacccgccacgaccgcgacagcctggtggccaagtacctgacgcac
acgccgatcaatttccaggagattgccggcaaaggcgccaaacagctgagctttgaccag
attgccctggaacaggcgggtaattacgccgccgaagaagcggacctgaccctgcgcctg
catgaagtcttcgacgcacggctggccgcgattccgaccctgcagccggtattgaacgat
atcgagatgccgctggtgcctgtgctggcgcgtatcgagcgccagggcgcgctggtcgat
gccaacctgctgggcatccagagcgtcgaactgggcgacaagatgaccgcgctggagcgc
gaagccttcgccattgccggcgaagagttcaacctcggttcgcccaagcagctgggcgtg
attctctacgaaaaactcggcatgccgattctcagcaagaccgccaccggccaggcatcg
actgccgaagcggtgcttgccgaactcgcggagcaggatttcccgctgcccaaggtgctg
atgcaataccgctcgatgagcaagctcaagagcacctacaccgaccgcctgccggagcag
atcaacccgcgcaccggacgtattcacacctcctatcatcaggcggtggccgttaccggg
cgcttgtcctccagcgatccgaacctgcagaacatcccgattcgtaccgctgaagggcgg
cgcatccgtcaggcattcgtggcgccgaagggctacaagctgctggccgccgactattcg
cagatcgaactgcgcatcatggcgcatctggcccaggacgaaggcttgctgcatgcattc
cgcaatgacctggacgttcaccgcgccacggcggcggaagtcttcggcgtcgagctggaa
aacgtcaccactgacatgcgtcgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcgttcggcctggccaagcagattggcgtggaccgcaagcagtcacaggcttac
gtcgaccgctacttcgcccgctaccccggcgtgctgaactacatggaacgcacccgcgcc
caggctgccgagcaaggtttcgtcgagaccatcttcggtcgtcgcctgtacctgccggac
atcaacgccaagaaccagtcactgcgcaaaggcgcggaacgcatggcgatcaacgcgccg
atgcagggcaccgctgcggatatcatcaagaaagccatggtggcggtgaacggctggctg
gacgagtccggcctggatgcacgggtaatcctgcaggtacacgatgaactggtgcttgaa
gtgcgcgaggacctggtcgatcagatcagtgaacagatccgtccgcacatgagcggcgca
gcagaattggccgtgccgttgctggtagaagtgggggttggcaacaattgggacgaggct
cactga
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