Pseudomonas syringae pv. syringae B728a: Psyr_0398
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Entry
Psyr_0398 CDS
T00246
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psyr_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_0398
Enzymes [BR:
psb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psyr_0398
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psyr_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
HypA
iSirtuin
WHD_PriA
Zn_ribbon_6
DUF4796_N
AAA_19
RUBY_RBDX
PIF1
TrwB_AAD_bind
AAA_16
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAY35468
UniProt:
Q4ZZF4
LinkDB
All DBs
Position
complement(425511..427730)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVSRSALQPGMRLRVPFGRREMIGILVEVVDHSEVP
ADKLKPAIALLDSEAPLPPALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAESRQER
FWHVAPGASVDDPRIARAPKQREALTTLAQHPHGVAHQLLSKLMLNRDSLNLLLAKELVY
VEVRSHAPSARHEHWLAQPELPLNTEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALIHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNQRAGGAQQPRFMRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCQRCDARMTVHQRSGELRCHHCGYVERVPRQC
PSCGKVDLRPVGAGTERAEERLAILFPDYPVLRVDRDSTSRKDAMNQLFTTIQRGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSASLPPFSHLALLRAEAHKPGQAETFLDQA
CSDAEQLVAQMALGGIELLGPVPAPMERRAGRYRAQLLVQSSARAPLHKLLATWLLALEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccatcctgcgccttgccctgccctcgccgcttcgccgcctgttcgactac
cgcgcccccgcgggcgtgtcgcgcagcgccttgcagccgggcatgcgtctgcgagtgccg
ttcggacgtcgggaaatgatcggcattctggtggaagtggtcgatcacagcgaagtaccc
gccgacaagctgaagccggctatcgccctgctcgacagtgaagcgccgctgccgcccgca
ctgttcaagctgtgcctgtggacctcgcagtactaccagcacagcctcggagacacactg
agctgggccttgccggtgctgctgcgtcagggcgaactggccgaaagtcgccaagagcgc
ttctggcatgtggccccgggcgccagcgtcgacgatccgcgcatcgcccgcgcgcccaag
cagcgcgaagccctgaccacccttgcccagcacccgcacggagtggcgcatcaactgctc
agcaagctgatgcttaacagggacagcctcaacctgttgctggccaaggagctggtgtac
gtcgaggtccgcagccatgcgcccagcgcacgccatgaacactggctggcccagcctgaa
ttgccactcaacaccgaacaacgcgccgcttacgaagcgatccgcgccggattcgacagc
tttcatgcgtttctgctggccggtgtcaccggcagcggcaagaccgaagtctatctgcaa
ctgatccgcgaaaccctcgaagccggcaagcaggcgctggtgctgatcccggaaatcaac
ctcggcccgcagaccctggcgcgcttcgagcaacgcttcaatgcgcgcattgcgctgatc
cactcggcggtcaacgaccgcgaacggctggacgcctggctggcggctcgcgatggcgag
gcggacatcatcatcggcacgcgttcggcgctgttcacgccgatgaaaaaccccggcctg
atcatcatcgacgaagaacacgacggttcctataaacagcaggaaggtctgcgctatcac
gcccgcgatctggcactggtgcgggcgcgtcaggaaaacattccgattgtcctgggctcg
gccacgccgtccctggaaagcctgcacaacgcctacaccggccgctatggcctgttgcgc
ctgaatcagcgcgcgggcggcgcacaacagccgcgtttcatgcgcctggacgtcaagagc
cgaccgctggacagcggcatctccgggcccatgcagcaggccatcggccagacgctcgcg
gcaggccagcaggtcttggtgttcctcaaccgtcgcggctttgcgccaaccttgctgtgc
cacgactgcggctggatgtccggctgccaacgctgcgatgcacgcatgaccgtgcaccag
cgctcgggcgaactgcgctgccatcactgcgggtatgtcgagcgcgtaccgcggcagtgc
ccgtcgtgcggcaaggtggatttgcgcccggtaggcgccggcaccgagcgcgccgaagaa
cgcctggcgattctgtttccggactaccccgtgctgcgtgtcgatcgcgacagcacgtcg
cgcaaggacgccatgaaccagctgttcacgacgatccagcgcggtcagccgtgcattctg
gtcggcacgcaaatgctcgccaagggccatcactttccccgggtcaccctggtctcgatt
ctggacgccgacggcgggctgttttccggcgacttccgcgccagcgagcgcatggcgcaa
ctgatcgtgcaggtggcaggccgtgccgggcgcgccgaagagcctggcaaggtgatcatc
cagacccacctggccgaccatccgttgctgatccagctgaccgagcagggttatttcgcc
tttgccgaacaagccttgagcgagcgccgttcagcgagtctgccaccgttttcacacctt
gcactgctgcgcgccgaagcgcacaagccgggacaggccgagacctttctcgatcaggcc
tgcagcgatgccgagcaactggttgcgcaaatggcgctgggcggcatagagctgctgggc
ccggttccggccccgatggaacgccgcgccggccgttatcgcgcgcaactgctggtgcag
tccagcgcccgcgcgccactgcataaattgcttgccacctggctgctcgcactggagcaa
atgcccagcggtcgacaggtcagatggtcgctggatgtggatcccgtggatctttattaa
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