Pseudomonas syringae pv. syringae B728a: Psyr_0536
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Entry
Psyr_0536 CDS
T00246
Name
(GenBank) ABC transporter, transmembrane region:ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Psyr_0536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_0536
Enzymes [BR:
psb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Psyr_0536
Transporters [BR:
psb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Psyr_0536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
RsgA_GTPase
NB-ARC
MMR_HSR1
nSTAND3
nSTAND1
APS_kinase
DUF3584
Bunya_G2
Motif
Other DBs
NCBI-ProteinID:
AAY35606
UniProt:
Q4ZZ16
LinkDB
All DBs
Position
604905..606707
Genome browser
AA seq
600 aa
AA seq
DB search
MTTSESSATSSVKIYFRLLSYVRPYVGIFLLSIIGFVIFASTQPMLAGILKYFVDGLTNP
EAVLFPNVPYLRELQLLQAVPLLIVLIAAWQGLGSFLGNYFLAKVSLGLVHDLRVELFNK
LLVLPNRYFDTTNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFIYLLMMNWKL
TLVMLAILPLIAVMVGTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQ
ARFAQASNSNTQKQLRMTKTGAIYTPMLQLVIYSAMAVLMFLVLFLRGEATAGDLVAYIT
AAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEEEVDTGTIERERVTGHLEVKNLSF
FYPQTARQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDIGNILLDGVEIND
YRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAREFIDQLPQG
FDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKG
RTTLVIAHRLSTIEKADLILVMDAGQIVERGTHTELLAQNGYYARLHAMGLDEPAPVGAV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctccgaatcgtccgcaacctccagcgtgaaaatctatttccgcctgttgtct
tatgtgcgtccgtatgtgggcattttcctgctcagcatcattggtttcgtgatcttcgcc
tcgacccagccgatgctcgccggcatcctgaaatatttcgtcgacggcctgaccaatccc
gaagcggtgctgtttcccaatgtcccgtatctgcgcgagttgcagctattgcaggccgtg
ccgctgctgatcgtgctgattgccgcatggcaggggctgggctcctttctgggcaactat
ttcctggccaaggtttccctggggctggtgcatgacctgcgggtagagctgttcaacaag
ctgctggtgctgcccaatcgttacttcgatacgaccaattccggtcatctgatctcgcgc
atcaccttcaacgtcacgatggtgaccggcgctgccaccgatgctatcaaggtggtgatt
cgcgaaggcctgaccgtggtgttcctgttcatctatctgctgatgatgaactggaagctg
acactggtcatgctcgcgatcctgccgttgattgccgtgatggtcggcaccgcgagcaag
aaattccgcaagcagagcaagaagatccaggtggcgatgggcgatgtcacgcatgttgcc
tcggaaaccattcagggctatcgcgtagtccgcagcttcggtggcgaggcctacgagcag
gcgcgctttgcccaggccagcaacagcaacacccaaaagcagctgcgcatgaccaagacc
ggcgccatctatacgccgatgctgcaactggtgatctacagcgccatggcggtgctgatg
ttcctggtgctgttcctgcgtggcgaggcaacagcgggtgatctggttgcctatatcacc
gctgcgggcctgctgcccaagccgattcggcagctgtcggaagtcagttcgacgatccag
aaaggcgtcgccggtgccgagagcatcttcgaacagctggatgtggaagaggaagtcgac
accggcaccatcgagcgtgagcgcgtgaccggccacctcgaggtgaagaacctcagcttc
ttctacccgcagactgcgcgtcaggtgttgaacgacatcagtttctccgccgcgccgggg
cagatgattgccctggtaggacgctccggcagcggcaagtcgaccctggccaacctgatc
ccgcgtttctacgggcacgacatcggcaacatcctgctcgatggcgtcgagatcaacgat
tatcgcttgcgtaacctgcgcaggcacatcgctcaggtcaatcagaacgtcacgctgttc
aacgacacgattgccaacaacattgcctacggcgatctggccggtgcgccgcgtgccgac
atcgaagcggctgccgctgatgcgtacgccagggaattcatcgaccagttgccgcagggg
ttcgacacccaggtgggcgaaaacggtgtgctgctgtccggcggtcaacgccagcgtctg
gcaattgcccgcgcgctgctcaagaacgccccgttgctgattctcgacgaagccacctcg
gcgctggacaccgagtccgagcggcacatccaggcggcgctggatcacgtcatgaagggc
cgtaccacgctggtcatcgcccaccgcctttcgaccatcgagaaggccgacctgattctg
gtcatggacgccgggcaaatcgtcgaacgcggtacgcacaccgagctgctggcgcagaac
ggctattacgcccgcctgcatgccatggggctggacgagccggctccggtcggcgcggtc
taa
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