Pseudomonas syringae pv. syringae B728a: Psyr_0544
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Entry
Psyr_0544 CDS
T00246
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00730
Thiamine metabolism
psb01100
Metabolic pathways
psb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Psyr_0544
Enzymes [BR:
psb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Psyr_0544
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AAY35614
UniProt:
Q4ZZ08
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All DBs
Position
615173..617062
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AA seq
629 aa
AA seq
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MSIKAKNAAHLRESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEI
NAPVTVYDTSGPYTDPNVIIDVRKGLADVRSPWIDSRNDTERLPGLSSNFGQQRLSDAEL
TALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLTQQHA
GHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGA
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKH
DVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaaagcaaaaaacgcagcccatttgcgcgagtcggcgcaggtcgattccgga
tcggtacagccgtttacccgttcgcagaaaatctacgttcagggctcgcgcccggacatc
cgcgtgccgatgcgcgaaatcaccctggatgtcaccccgactgactttggcggcgagatc
aacgccccggtcacggtctatgacacctcggggccctacaccgaccccaatgtgatcatc
gacgtgcgcaaaggcctggctgacgtgcgctcgccatggatcgactcgcgcaatgacacc
gagcgtctgccgggcctgagttccaacttcggccagcaacgcctgagcgatgccgagctc
accgcgctgcgctttgcccatgtgcgcaacccgcgccgggccaaggccggtgccaacgtc
agccagatgcactatgcgcgtcagggcatcattaccgccgagatggaatacgtcgccatc
cgcgagaacatgaagcttcaggaagcccgcgccgcaggtctgctgacccagcaacatgcc
gggcacagctttggcgcgagtattccgaaggaaatcactgccgagttcgtgcgtgaagag
attgcccggggccgcgcgatcatcccggccaacatcaaccacgtcgagcttgagccgatg
atcatcggccgcaacttcctggtgaagatcaacggcaacatcggcaacagcgcactgggc
tcttccattgaagaagaggtcgccaagctgacctggggtatccgctggggctcggacacg
gtcatggacctgtccaccggcaagcacattcacgaaacccgtgagtggatcatccgcaat
tcgccggtgccgatcggtacggtgccgatctatcaggcgctggaaaaagtggggggtgca
gccgaggacctgacctgggagctgttccgcgacacgctgatcgagcaggccgagcagggc
gtcgattacttcaccatccacgccggagtgctgctgcgttacgtgccgctgaccgccaag
cgtgtcaccggtatcgtcagccgtggcggttcgatcatggccaaatggtgcctggcgcac
cacaaggaaaacttcctttacacccatttcgaagacatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggcgacggcctgcgtccgggctcgattgccgacgccaacgat
gcggcgcagttcggcgaactggaaacgcttggcgaactgaccaagattgcctggaaacat
gacgtgcagaccatgatcgaaggccccggccatgtgccgatgcagttgatcaaggaaaac
atggacaagcagctggaatgctgcgacgaagcgccgttctacaccctgggcccgctgacc
accgacatcgcgccgggttacgaccacatcacctcgggcatcggcgcggccatgatcggc
tggttcggctgcgccatgctgtgttacgtcacgcccaaggagcatctggggctgccgaac
aaggatgacgtcaaaaccgggatcatcacctacaagatcgcggcccatgcggcggacctt
gccaaaggccacccgggtgcgcagatccgtgacaacgcgttgagcaaggcgcgtttcgag
ttccgctgggaagaccagttcaacctcggcctggacccggacaccgcgcgttcgtaccac
gacgaaaccctgcccaaggattcggccaaggtcgcgcacttctgctccatgtgcgggccg
aaattctgctcgatgaagatcactcaggaagtccgcgagtacgccgccaaccagcgcatc
gaggcggtagacgtcgatgtcgccaagggcctggccgaacaggccgagcgcttcaagcag
gagggtagtcagctgtacaagaaggtgtaa
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