Pseudomonas syringae pv. syringae B728a: Psyr_0572
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Entry
Psyr_0572 CDS
T00246
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02024
Quorum sensing
psb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psyr_0572
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psyr_0572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psb03019
]
Psyr_0572
03036 Chromosome and associated proteins [BR:
psb03036
]
Psyr_0572
Messenger RNA biogenesis [BR:
psb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Psyr_0572
Chromosome and associated proteins [BR:
psb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Psyr_0572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AAY35642
UniProt:
Q4ZYY0
LinkDB
All DBs
Position
650619..650879
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AA seq
86 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSATDADGADAEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacctgaataccttgcgtaaagagaaggtc
ggggtatcgatctatctggtcaacggtatcaagctgcagggtacgatcgagtctttcgac
cagttcgtcattttgctgaagaacacggtcagccagatggtctacaaacacgccatttcc
accgtcgtaccggttcgtccgatccgcctgccaagcgctacagacgctgacggcgcggac
gccgagccaggtaacgcctga
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