Pseudomonas syringae pv. syringae B728a: Psyr_1358
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Entry
Psyr_1358 CDS
T00246
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03030
DNA replication
psb03430
Mismatch repair
psb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyr_1358
03430 Mismatch repair
Psyr_1358
03440 Homologous recombination
Psyr_1358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psb03032
]
Psyr_1358
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_1358
Enzymes [BR:
psb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyr_1358
DNA replication proteins [BR:
psb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psyr_1358
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psyr_1358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AAY36409
UniProt:
Q4ZWR3
LinkDB
All DBs
Position
1538020..1541541
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKALTGMNMPAVAVTDQNNMCSLVKFYKAAQGSG
IKPICGVDLWLAGRDEDAALSRISLLAMNAQGYRNLTELISRGFIEGQRNGQIVIQRQWV
AQASEGVIALSAAKEGEIGMALLGGNPGEADELLREWLEVFPDRFYIEVQRTNRANDEEH
LHAAVALAERHGAPLVATNDVRFIKQADFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMALKLEGIVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDMPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIDGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITDARQNGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFELEP
KAYQANIDRNRSVLLAALEEAIQAAEQTARSRDSGHSDLFGGLFVEADADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
AKRVMSIEDARTNLAESLRVTVRAEALKGDRLRWLGDLCKRHRGACPITVDYTGQDARAL
LQLGEAWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatattcgctggttgacggtctg
gttcgggtcaaaccgttgatcaaggcgctgaccggcatgaacatgcccgccgtggcggtg
accgaccagaacaacatgtgctcgctggtcaagttctacaaggccgcccagggctccggc
atcaagccgatctgcggtgtcgacctgtggctggcgggcagggacgaagatgccgcgctc
agccgcatcagcctgctggccatgaatgcccagggctaccgcaacctgaccgagttgatt
tcccgaggctttatcgaaggccagcgcaacggtcagatcgtcattcagcgtcagtgggtc
gcgcaggccagtgaaggcgtgattgcgctttctgcggccaaggaaggcgagatcggcatg
gccttgctcggcggcaatccgggggaggccgacgaactgctgcgcgagtggctggaagtc
tttcctgaccgcttctatatcgaagtgcagcgcaccaaccgcgccaatgacgaagaacat
ctgcacgctgcggtggccctggccgagcgtcacggtgcaccgctggtggcgaccaacgat
gtgcgcttcatcaaacaggccgatttcgaagctcacgaaacccgcgtatgcatcggtgaa
gggcgtgcgctggacgacccgcgtcgctcgcacaactatagcgatcagcaatacctgaaa
agcccggaagaaatggccgagctgttcagcgatctgccggaagcgctggaaaacaccgtc
gagattgccaagcgctgcaacatcgacgtcaagctgggcacgcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgatgagtatttccgcaaggtctccttcgacggcctc
gaagagcgtcttgcagtcctgttgcccaaggacacgaccgaagattacgaagccaagcgt
caggtgtatgtcgaccggctgaatttcgagctggatatcattatccagatgggctttccc
ggttacttcctgatcgtgatggacttcatccagtgggccaagagcaacggcgtaccggtg
gggccgggtcgtggttcgggtgccggatcgctggttgcctatgtacagaagatcaccgac
ctcgacccgctggaatacgacctgctgttcgaacgcttcctgaacccggagcgggtttcc
atgcctgacttcgacgtcgacttctgcatggatggtcgtgaccgggtgatcgaatatgtg
gccgagaagtacggtcgcaacgcggtcagccagatcatcaccttcggttccatggccgcc
aaggcggtggtgcgtgacgtggcgcgggtgcagggcaagtcttacgggctggctgatcgt
ctgtcgaagatgatcccgttcgaggtcggcatgaccctcgaaaaagcctacgagcaggaa
gagattcttcgcgatttcctcaaggtcgatgaggaagctgcagaaatctgggagatggcg
ctcaagctcgaaggcattgtgcgtaacgtcggcaagcacgccggcggtgtggttattgcc
ccgaccaagctgaccgacttctcgccgatctattgcgacgaggccggtgacggtctggtg
acccagttcgacaaggacgatgtcgaggctgcggggctggtgaagttcgacttcctcggt
ctgcgtaccctgaccatcatcgactgggcactcaagaccatcaaccgcgaccgcgccaag
gtcaacgaagaaccgctggacatcgcgttcatcccgctcgatgacatgccgacctatcag
ttgctacagcgcgccgagaccacggcagtgttccagctcgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgtctggaagacctgatcgcactggtggcactgttc
cgtcccggcccgttgcaatcgggtatggtcgacgacttcatcaaccgtaaacacggtcgc
gccgagctgtcctatccgcacgtcgattaccagtacgaaggcctcaagccggtactggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtcatggcc
ggttacacccttggcggtgcggacatgctgcgtcgtgccatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggtggtttcatcgatggctgcaagaccaataacatcgacccg
gacctggccggtaacatcttcgacctggtggaaaagttcgccggttacggtttcaacaag
tcccactccgcggcctacgggctggtgtcgtaccagactgcctggctgaagactcactac
ccggcgccgttcatggcggcggtattgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagctgcgcctcgatgcgccggacgtgaacacc
tcggagttcaagttcacggtaagcgacgatggccgcattctttatggcctcggtgcgatc
aagggggtaggcgaggggccggtcgaggcgattaccgacgcgcgccagaacgggccgttc
aaggaccttttcgatttctgcgcccgcgtcgacctcaagcgggtcaacaagcgaaccctg
gatgggctgattcgcagcggtgcgctggatcgcctcgggccgtacttcgaactggagccc
aaggcctatcaggccaatatcgaccgtaaccgttcggtgctgcttgccgcactggaagaa
gccattcaggcagcagagcagacggcgcgcagtcgcgacagtggtcactcggacctgttc
ggcggcctgttcgtcgaagcggatgccgatgtctacgccaaccatcgcaagacccgcgag
ctgagcctcaaggatcgtctgcgtggcgagaaggaaaccctggggctgtacctgaccggg
catccgatcgatgaatatgaaggcgagatccgccggttcgcccggcaacggatcatcgat
ctcaagccggcaagagacactcagacggtggcaggtctgatcattgccctgcgcgtcatg
aagaacaagaagggcgacaagatggggttcattaccctggacgatcgctcggcgcgcatc
gaggcgtcgctgtttgccgaagcgttccattcggctcagtcactgttgcagaccgatgct
atggtggtggtcgagggcgaagtcagtaatgatgacttctccggcgggctgcgcctgcgc
gccaagcgtgtcatgagtatcgaggatgcccgcaccaatctggccgagagcctgcgtgtg
acggtgcgtgccgaagcgctcaagggcgaccggctgcgctggctgggcgatctgtgcaag
cgccatcgcggtgcctgtccgatcacggtggactacacggggcaggacgcccgtgcattg
ctgcaattgggagaagcatggcggattgatcctgcggacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgttga
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