Entry |
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Name |
(GenBank) exonuclease SbcC
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
psb Pseudomonas syringae pv. syringae B728a
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Brite |
KEGG Orthology (KO) [BR:psb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:psb03400]
Psyr_1714
DNA repair and recombination proteins [BR:psb03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psyr_1714
Archaeal homologous recombinant proteins
Psyr_1714
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1939647..1943291)
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AA seq |
1214 aa
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT
KKLQASRQTLTDLDSEQILSNQSKREFEQLIENRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEDALKTLTAQASNIIPLAPELLAELEQRL
SDAQQQLKAHQTQQRQLEIKQQWLTELHRLRDEQLAAQEALNSAQQAWDEHSGARQTLGQ
LERLGPQRHRFARRVTLNAQLDPLAEQIRQHQRQQTSLHDQQQQLESRRTQAQTSLLEAQ
QAHSSAKPLLLQAFEAQNTLNHLAQELAKASDLHQQSEQLCIQGKTSLQTLLDQQQQVAQ
RLERIAGQLQHSSELAPLAQAWNAWRDRLKSLTLIANRLKHGHSELPALQQRAKTADQQL
TEQRSALELLYREADCEVEAVTEQVQILGSLLQDNRKQQRAFEELARLWASQQDVDRQLA
DLSQQQQSAQQQREQLNSEGLRVRDELTVAEQTLTVTRQLLERQRLARSASVEELRVQLQ
DDQPCPVCGSIEHPWHQPEALLESLTQHDDNEQASAQKAVDLLTEQRNQLREQVGGVIAR
QKELLRQHEQLTVRHQALAPDLESHPLAAQLLDRDADKRDGWLSQQLSQLSEVISRDEQR
QQALLTLQKDAARLQQQLQAATEASQTAAGHVAEQLKQLEADGQRLEEELTAFTPLVSPQ
VLEGLRSDASATVLQLEQQVTQRLDQLEQQHEEQQEQTERQQKIEKQQVEQQTRLHRQTE
LAQELTRLGEQQQTSQQTLAGLLGDHASAEQWQQALEQTIDQARQAESLAAQALQDIHNQ
LIQLAAELKSGQQQQQSLQQELAELDVQISEWRAQHPQLDDSALDTLLTYDDAHVEQLRV
QLNSTDKALEQAKVLLQERDQRLQQHQAQHSDLTDSAQLATALQQALEQSALSEQHCADL
RAELSEDQRRRNANSELQARIADANSEYLRWARLASLIGSAEGDRFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGH |
NT seq |
3645 nt +upstreamnt +downstreamnt
atgaaaattctcgccattcgcctgaaaaacctggcctcgctggccggaccctttgaaatc
gatttcactgccgagccgctggccagcgccggactgtttgccatcaccggcccgactggc
gcgggcaaaagcacgctgctcgatgccctgtgcctggcgctgttcggggcgattccgcgg
ctgagtaatattggtcagtccaaggtcccggacatcgacggcgacatcaccaccagcgac
ccacgtaccctgctgcgccgcggcacgggcagcggttacgccgaggtggacttcatcggc
attgatcagcggcgttatcgcgcgcgctgggaaaccaatcgcgcgcgcgacaatgcgact
aaaaagctgcaggccagccgccagaccctcaccgatctggacagcgagcaaatcctcagc
aaccagagcaaacgcgaattcgagcaactgatcgaaaaccgcctgggcctgaacttcgag
cagttcacccgtgccgtaatgcttgcccagagtgagttcagcgcattcctcaaggcggat
gacaaggaacgcagcgaactgctggaaaagctcaccaacaccgcgatctacagccagctc
ggtcgacgcgcctacagtaaaagcaaggaagccgaagacgccctgaaaaccctgaccgcg
caggccagcaacatcatcccgctggccccggaactgctggctgaactggagcagcgcctg
agcgacgcgcagcaacagctcaaggcccatcagacacagcaacggcaactggaaatcaaa
cagcagtggctgaccgagctgcaccgtctgcgtgacgaacagctcgctgcccaggaagcc
ctgaacagtgcgcaacaggcctgggacgagcacagcggtgcacgccagaccctcggccag
ctggaacgcctgggcccgcagcgccatcgcttcgcgcgtcgggtcacactgaacgctcag
cttgatccgctggctgaacagattcgccagcatcagcgacagcagacctcgctgcacgac
cagcagcaacagctggaaagccgccgtactcaggcgcagaccagtctgctggaagcacag
caagcgcacagcagcgccaaaccgctgttgctgcaggctttcgaagcacagaacaccctg
aaccacctggcccaggaactggccaaggcgtccgacctgcaccagcagagcgagcagctc
tgcatccagggcaagaccagcctgcaaaccctgctcgatcagcaacagcaggtggctcaa
cgtctggagcgtattgccgggcaactgcagcacagcagcgaactggcaccgctggctcag
gcctggaacgcgtggcgtgaccggctgaaatccctcacgctgatcgccaatcgtctcaag
cacggccacagtgagctgccggcgctgcagcagcgtgccaagactgccgatcagcagttg
accgagcaacgcagcgcgctggagttgctgtaccgcgaagccgattgcgaagtggaggca
gtgaccgagcaggtgcagattctcggcagcctgttgcaggacaaccgcaaacagcagcgt
gccttcgaggaactggcccgtctatgggccagtcagcaagacgtcgaccgccagcttgcc
gacctctcccagcaacagcagagcgcccagcagcaacgcgaacagctcaacagcgaaggc
cttcgcgttcgtgatgaactgaccgtcgccgaacagaccctgaccgtcacccggcaactg
ctggagcgccaacggctggcccgcagcgccagtgtcgaagagttgcgcgtgcagttgcag
gacgaccagccctgcccggtctgtggcagcattgaacacccctggcatcagccggaggcg
ctgctcgaaagcctcacgcaacacgacgacaacgagcaggccagcgcgcagaaagccgtg
gacctgctgaccgagcaacgcaatcagttgcgtgaacaggtcggcggcgtaatcgcccgg
cagaaagagctgctgcgccagcatgagcagctcacagtgcgccatcaggctttggcaccg
gacctggagtcacaccccctcgccgcccaattgctagaccgcgacgccgacaagcgcgac
ggctggttgagccagcaattgagtcaactgagcgaagtcatcagccgtgacgagcaacgt
cagcaagccttgttgaccctgcaaaaagacgctgcgcgcctgcagcagcagcttcaggcg
gcgaccgaagccagccagaccgctgcgggtcatgttgccgagcagctcaaacaactggag
gccgacgggcagcgactggaagaagaactgacggcattcacgccgctggtatcaccgcag
gtgcttgaagggctgcgcagtgatgcatcggcgaccgtgctgcagctcgaacagcaggtg
acccagcgtctcgatcagctggagcagcaacacgaagagcagcaggagcaaaccgagcgt
cagcagaagatcgagaagcagcaggtcgagcagcagacgcgtctgcaccgccagaccgaa
ctggcgcaggaactcacccggctcggcgagcaacagcagaccagtcagcagacgcttgcc
ggtctgctgggcgaccacgctagcgcagagcaatggcagcaggcgctggagcagaccatc
gatcaggccaggcaggcggaaagtctggcggcgcaggcgctgcaggacatccacaatcag
ctgattcaactggctgccgaactcaagtccggacagcaacaacagcagtccctgcaacag
gaactggctgaacttgatgtgcagatcagcgaatggcgcgctcagcatcctcagctggac
gatagcgcgctggacaccttgctgacctacgacgatgcgcatgtcgagcaactgcgtgtg
caattgaatagcaccgacaaggcgctggaacaggcaaaagtgttgctgcaggaacgcgat
cagcgtctgcaacagcatcaggcgcaacacagtgacctgaccgacagtgcgcaactggcg
acagcactgcaacaggcccttgaacagtcggcgctcagcgagcagcactgcgccgacctg
cgggccgagctcagtgaagatcagcgccgccgcaacgccaacagcgaactgcaggcgcgc
atcgccgacgccaacagcgaatacctgcgctgggcacgtctggcctcattgatcggctcg
gcagaaggcgacaggtttcgcaaaatcgcccaggcctacaacctcgacctgctggtccat
cacgccaatgcgcagctcaggcaactggtgcgccgctaccgcctgaaacgcggcggcagc
atgctcggtctactggtcatggacacggaaatgggcgacgaactgcgctcggttcactcg
ctgtccggcggggaaaccttcctcgtctcgctggcactggcgctgggcctcgcctcgatg
gcatccagcaccttgcgcatcgagtcactgttcatcgacgaaggcttcggcagcctcgac
ccggagtcgctgcaactggcgatggacgctctcgacggcttgcaggcacagggtcgcaag
gtcggcgtgatctcccacgtccaggaaatgcacgaacgaatcccggtgcagatcaaggtg
cgtcgtcagggcaatggattgagcaccatcgaggtggggcactga |