Pseudomonas syringae pv. syringae B728a: Psyr_1714
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Entry
Psyr_1714 CDS
T00246
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_1714
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psyr_1714
Archaeal homologous recombinant proteins
Psyr_1714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
Snapin_Pallidin
MMR_HSR1
AAA_22
RsgA_GTPase
cobW
Motif
Other DBs
NCBI-ProteinID:
AAY36762
UniProt:
Q4ZVR0
LinkDB
All DBs
Position
complement(1939647..1943291)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT
KKLQASRQTLTDLDSEQILSNQSKREFEQLIENRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEDALKTLTAQASNIIPLAPELLAELEQRL
SDAQQQLKAHQTQQRQLEIKQQWLTELHRLRDEQLAAQEALNSAQQAWDEHSGARQTLGQ
LERLGPQRHRFARRVTLNAQLDPLAEQIRQHQRQQTSLHDQQQQLESRRTQAQTSLLEAQ
QAHSSAKPLLLQAFEAQNTLNHLAQELAKASDLHQQSEQLCIQGKTSLQTLLDQQQQVAQ
RLERIAGQLQHSSELAPLAQAWNAWRDRLKSLTLIANRLKHGHSELPALQQRAKTADQQL
TEQRSALELLYREADCEVEAVTEQVQILGSLLQDNRKQQRAFEELARLWASQQDVDRQLA
DLSQQQQSAQQQREQLNSEGLRVRDELTVAEQTLTVTRQLLERQRLARSASVEELRVQLQ
DDQPCPVCGSIEHPWHQPEALLESLTQHDDNEQASAQKAVDLLTEQRNQLREQVGGVIAR
QKELLRQHEQLTVRHQALAPDLESHPLAAQLLDRDADKRDGWLSQQLSQLSEVISRDEQR
QQALLTLQKDAARLQQQLQAATEASQTAAGHVAEQLKQLEADGQRLEEELTAFTPLVSPQ
VLEGLRSDASATVLQLEQQVTQRLDQLEQQHEEQQEQTERQQKIEKQQVEQQTRLHRQTE
LAQELTRLGEQQQTSQQTLAGLLGDHASAEQWQQALEQTIDQARQAESLAAQALQDIHNQ
LIQLAAELKSGQQQQQSLQQELAELDVQISEWRAQHPQLDDSALDTLLTYDDAHVEQLRV
QLNSTDKALEQAKVLLQERDQRLQQHQAQHSDLTDSAQLATALQQALEQSALSEQHCADL
RAELSEDQRRRNANSELQARIADANSEYLRWARLASLIGSAEGDRFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGH
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccattcgcctgaaaaacctggcctcgctggccggaccctttgaaatc
gatttcactgccgagccgctggccagcgccggactgtttgccatcaccggcccgactggc
gcgggcaaaagcacgctgctcgatgccctgtgcctggcgctgttcggggcgattccgcgg
ctgagtaatattggtcagtccaaggtcccggacatcgacggcgacatcaccaccagcgac
ccacgtaccctgctgcgccgcggcacgggcagcggttacgccgaggtggacttcatcggc
attgatcagcggcgttatcgcgcgcgctgggaaaccaatcgcgcgcgcgacaatgcgact
aaaaagctgcaggccagccgccagaccctcaccgatctggacagcgagcaaatcctcagc
aaccagagcaaacgcgaattcgagcaactgatcgaaaaccgcctgggcctgaacttcgag
cagttcacccgtgccgtaatgcttgcccagagtgagttcagcgcattcctcaaggcggat
gacaaggaacgcagcgaactgctggaaaagctcaccaacaccgcgatctacagccagctc
ggtcgacgcgcctacagtaaaagcaaggaagccgaagacgccctgaaaaccctgaccgcg
caggccagcaacatcatcccgctggccccggaactgctggctgaactggagcagcgcctg
agcgacgcgcagcaacagctcaaggcccatcagacacagcaacggcaactggaaatcaaa
cagcagtggctgaccgagctgcaccgtctgcgtgacgaacagctcgctgcccaggaagcc
ctgaacagtgcgcaacaggcctgggacgagcacagcggtgcacgccagaccctcggccag
ctggaacgcctgggcccgcagcgccatcgcttcgcgcgtcgggtcacactgaacgctcag
cttgatccgctggctgaacagattcgccagcatcagcgacagcagacctcgctgcacgac
cagcagcaacagctggaaagccgccgtactcaggcgcagaccagtctgctggaagcacag
caagcgcacagcagcgccaaaccgctgttgctgcaggctttcgaagcacagaacaccctg
aaccacctggcccaggaactggccaaggcgtccgacctgcaccagcagagcgagcagctc
tgcatccagggcaagaccagcctgcaaaccctgctcgatcagcaacagcaggtggctcaa
cgtctggagcgtattgccgggcaactgcagcacagcagcgaactggcaccgctggctcag
gcctggaacgcgtggcgtgaccggctgaaatccctcacgctgatcgccaatcgtctcaag
cacggccacagtgagctgccggcgctgcagcagcgtgccaagactgccgatcagcagttg
accgagcaacgcagcgcgctggagttgctgtaccgcgaagccgattgcgaagtggaggca
gtgaccgagcaggtgcagattctcggcagcctgttgcaggacaaccgcaaacagcagcgt
gccttcgaggaactggcccgtctatgggccagtcagcaagacgtcgaccgccagcttgcc
gacctctcccagcaacagcagagcgcccagcagcaacgcgaacagctcaacagcgaaggc
cttcgcgttcgtgatgaactgaccgtcgccgaacagaccctgaccgtcacccggcaactg
ctggagcgccaacggctggcccgcagcgccagtgtcgaagagttgcgcgtgcagttgcag
gacgaccagccctgcccggtctgtggcagcattgaacacccctggcatcagccggaggcg
ctgctcgaaagcctcacgcaacacgacgacaacgagcaggccagcgcgcagaaagccgtg
gacctgctgaccgagcaacgcaatcagttgcgtgaacaggtcggcggcgtaatcgcccgg
cagaaagagctgctgcgccagcatgagcagctcacagtgcgccatcaggctttggcaccg
gacctggagtcacaccccctcgccgcccaattgctagaccgcgacgccgacaagcgcgac
ggctggttgagccagcaattgagtcaactgagcgaagtcatcagccgtgacgagcaacgt
cagcaagccttgttgaccctgcaaaaagacgctgcgcgcctgcagcagcagcttcaggcg
gcgaccgaagccagccagaccgctgcgggtcatgttgccgagcagctcaaacaactggag
gccgacgggcagcgactggaagaagaactgacggcattcacgccgctggtatcaccgcag
gtgcttgaagggctgcgcagtgatgcatcggcgaccgtgctgcagctcgaacagcaggtg
acccagcgtctcgatcagctggagcagcaacacgaagagcagcaggagcaaaccgagcgt
cagcagaagatcgagaagcagcaggtcgagcagcagacgcgtctgcaccgccagaccgaa
ctggcgcaggaactcacccggctcggcgagcaacagcagaccagtcagcagacgcttgcc
ggtctgctgggcgaccacgctagcgcagagcaatggcagcaggcgctggagcagaccatc
gatcaggccaggcaggcggaaagtctggcggcgcaggcgctgcaggacatccacaatcag
ctgattcaactggctgccgaactcaagtccggacagcaacaacagcagtccctgcaacag
gaactggctgaacttgatgtgcagatcagcgaatggcgcgctcagcatcctcagctggac
gatagcgcgctggacaccttgctgacctacgacgatgcgcatgtcgagcaactgcgtgtg
caattgaatagcaccgacaaggcgctggaacaggcaaaagtgttgctgcaggaacgcgat
cagcgtctgcaacagcatcaggcgcaacacagtgacctgaccgacagtgcgcaactggcg
acagcactgcaacaggcccttgaacagtcggcgctcagcgagcagcactgcgccgacctg
cgggccgagctcagtgaagatcagcgccgccgcaacgccaacagcgaactgcaggcgcgc
atcgccgacgccaacagcgaatacctgcgctgggcacgtctggcctcattgatcggctcg
gcagaaggcgacaggtttcgcaaaatcgcccaggcctacaacctcgacctgctggtccat
cacgccaatgcgcagctcaggcaactggtgcgccgctaccgcctgaaacgcggcggcagc
atgctcggtctactggtcatggacacggaaatgggcgacgaactgcgctcggttcactcg
ctgtccggcggggaaaccttcctcgtctcgctggcactggcgctgggcctcgcctcgatg
gcatccagcaccttgcgcatcgagtcactgttcatcgacgaaggcttcggcagcctcgac
ccggagtcgctgcaactggcgatggacgctctcgacggcttgcaggcacagggtcgcaag
gtcggcgtgatctcccacgtccaggaaatgcacgaacgaatcccggtgcagatcaaggtg
cgtcgtcagggcaatggattgagcaccatcgaggtggggcactga
DBGET
integrated database retrieval system
