Pseudomonas syringae pv. syringae B728a: Psyr_1974
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Entry
Psyr_1974 CDS
T00246
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psyr_1974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_1974
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psyr_1974
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Psyr_1974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AAY37017
UniProt:
Q4ZV05
LinkDB
All DBs
Position
2290405..2292420
Genome browser
AA seq
671 aa
AA seq
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MSEFQLVTRFEPAGDQPEAIRQLVEGIDAGLAHQTLLGVTGSGKTFSIANVISQIKRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLRMVMHIDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLIEAMENIKVELQERLEYLRSQNKLVEAQRLEQRTRFDLEMMLELG
YCNGIENYSRYLSGRPSGAPPPTLFDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRIVEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEIHKRAALEERVLVTTLTKRMSEDLTDYLSDHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLEHGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENARYENELRSPSEINKRIRQLEEKMYQLARDLEFEAAAQMRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgttacccgctttgagccagccggcgatcagcccgaggccatt
cgccaactggtcgaagggatcgacgcagggctcgcgcaccagaccttgctcggggtgacc
ggctcgggcaagacgttcagcatcgccaacgtgatttcccagatcaagcgtccgacgctg
gtgctggcaccgaacaagaccctggccgcgcagttgtatggcgaattcaaggcgtttttc
ccgaacaacgccgtggagtacttcgtttcctactacgactactaccagcccgaagcctat
gtgccgtcgtccgacaccttcatcgagaaggatgcgtcgatcaacgaccacatcgaacag
atgcgcctgtcggcgaccaaggcgctgctggagcgcaaggatgcgatcatcgtcaccacg
gtgtcgtgcatttacggtctgggcagtccggaaacctatctgcgcatggtcatgcacatc
gatcgcggcgacaaactcgatcagcgtgccttgctgcgccgcctggccgatctgcaatac
acccgtaacgacatggactttgcccgtgcgaccttccgggtgcgcggcgacgtgatcgac
atctacccggccgaatccgatctggaagcgatccgggtcgaactgttcgatgacgaggtc
gagagcctgtcggcgttcgatccgctgaccggcgaggtgatccgcaagctgccgcgcttc
accttctatccgaaaagccactacgttaccccgcgcgaaacgctgatcgaggcgatggaa
aacatcaaggtcgagctgcaggagcgcctcgaatacctgcgcagccagaacaaactggtg
gaagcccagcgtcttgagcaacgcacccgtttcgatctggaaatgatgctcgagctgggt
tactgcaacggtatcgaaaactactcgcgctacctgtcgggccgtccgtccggtgcgccg
ccaccaaccttgtttgactacctgccccccgatgccttgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtcggcgcgatgtacaaaggtgaccgttcgcgcaaggaaaccctg
gtcgagtacggcttccgcctgccgtcggcactggataaccggccgatgcgcttcgatgag
tgggaggcgatcagcccgcagaccattttcgtctcggcgactccgggtaactacgaggcc
gagcacgctgggcgtatcgtcgagcaagtggtgcgtccgaccggcctggtggacccgcag
atcgagattcgtccggcgctgactcaggtcgacgacctgctgtcggaaattcacaagcgt
gctgcgcttgaggaacgggtactggtcaccacgctgaccaaacgcatgtccgaggatttg
accgactacctgagtgaccacggcgtgcgggtgcgctacctgcactcggacatcgatacg
gtggaacgtgtcgaaatcatccgtgacctgcgactggggacgttcgacgtgctggtgggc
atcaacctgctgcgcgaaggtctggacatgcctgaagtgtcactggtggcgattctcgat
gccgacaaggaaggcttcctgcgctccgaccgttcgctgatccagaccattggccgggcc
gcacggaacctcaacggccgggcgattctgtatgccgaccggattaccggctcgatggag
cgcgccatcggcgagaccgagcgacgtcgcgagaagcagatcgctttcaacctggaacac
ggtattacgcccaaaggcgtattcaaggacgtcgccgacatcatggaaggcgccaccgtg
cctggctcgcgcagcaagaagcgcaaaggcatggccaaagccgccgaagaaaacgcccgc
tacgagaacgaactgcgctcgccgagcgagatcaacaaacgcattcgccaactggaagaa
aaaatgtaccaactggcccgcgacctggaattcgaagccgctgcgcagatgcgcgacgaa
atcggcaaactgcgcgagcgcttgctggcggtttga
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