Pseudomonas syringae pv. syringae B728a: Psyr_2007
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Entry
Psyr_2007 CDS
T00246
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00020
Citrate cycle (TCA cycle)
psb00190
Oxidative phosphorylation
psb00650
Butanoate metabolism
psb00720
Other carbon fixation pathways
psb01100
Metabolic pathways
psb01110
Biosynthesis of secondary metabolites
psb01120
Microbial metabolism in diverse environments
psb01200
Carbon metabolism
Module
psb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psb_M00149
Succinate dehydrogenase, prokaryotes
psb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Psyr_2007
00650 Butanoate metabolism
Psyr_2007
09102 Energy metabolism
00190 Oxidative phosphorylation
Psyr_2007
00720 Other carbon fixation pathways
Psyr_2007
Enzymes [BR:
psb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Psyr_2007
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
NurA
Motif
Other DBs
NCBI-ProteinID:
AAY37050
UniProt:
Q4ZUX2
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Position
2326912..2328684
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AA seq
590 aa
AA seq
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MANINALSFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKAGTVFLNEYYAVDLVKNNDGAF
VGIIAICIETGETSYIRANATVLATGGAGRIYSSTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPDGDHVMLKLDHLGEEVLHSRLPGIMELSKTFAHVDPATAPIPVVPTCHYMMG
GVATNIHGQAITQDAAGVDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGIH
LEQALREGVDYARASESDIDAALARLAGLNERTTGEDVATLRKELQSCMQNYFGVFRTGE
YMQKGIAQLADLRVRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKSVTKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattaatgcgctttctttcgacgccatcatcattggtggtggcggtgccggc
atgcgcgctgcgctgcagctcgcccagggcggtcacaagactgccgtggtcaccaaggtc
ttcccgacccgctcgcataccgtatccgcccagggtggcatcacctgtgcaatcgcttcc
gccgatccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgttccgtaggtccggaagcggtcttcgag
ctcgagcacatgggcctgccgttctcccgtaccgagcagggccgtatctaccagcgtccg
ttcggtggccagtccaaggacttcggcaagggcgggcaggctgcccgtacctgcgctgcc
gccgaccgtaccggtcacgcgctgctgcacaccctgtatcaggccaacctgaaggccggc
actgtattcctcaacgaatactatgcagtggatctggtgaagaacaacgatggcgccttt
gtcggcatcatcgcgatctgcatcgagacgggcgaaacctcgtacatccgcgccaatgca
accgtgctggcgaccggcggtgcaggccgtatctactcgtcgaccaccaacgccctgatc
aataccggtgacggtatcggcatggcgctgcgtgccggtgtgccggttcaggacatcgaa
atgtggcagttccacccgaccggcattgccggcgcaggtgtactggtcaccgaaggttgc
cgcggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggagcgttacgct
ccgaacgccaaggaccttgccggtcgtgacgttgtggcacgttccatggtcaaggaaatc
attgccggtaacggctgtggtcccgatggcgatcatgtgatgctcaagctcgatcacctt
ggcgaagaagtgctgcacagccgtctgccaggcatcatggaactgtccaagaccttcgct
cacgtcgatcctgcgaccgcgccgattcctgtcgtaccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggcgatcactcaggatgcggcgggcgtcgatcag
atcattcctggtctgttcgcggtcggtgaagtggcttgcgtatcggttcacggcgccaac
cgtctgggcggcaactcgctgctcgatctggtggtgttcggccgcgcggcgggtatccac
ctggagcaggcgctgcgtgaaggcgtcgattatgcgcgcgcttccgagtccgacatcgat
gctgccctcgcacgccttgccggcctgaacgagcgcaccaccggtgaagacgttgcaacc
ctgcgaaaagagctgcagagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtattgcccagctggctgatctgcgcgtacgtatcgccaacgtcaag
atcaacgacaagagccaggcgttcaacaccgcccgtatcgaagcgcttgaactgcaaaac
ctgctggaagttgccgaagccacggcgattgccgcagagcatcgtaaagagtcccgcggc
gctcacgctcgtgaagacttcgaagatcgcgatgacgagaactggttgtgccacaccctg
tatttcccgggtgacaagagtgtgaccaaacgtgccgtgaacttctcgccgaaaactgtc
ccgacttttgaaccgaagattcggacttattaa
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