Pseudomonas syringae pv. syringae B728a: Psyr_2034
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Entry
Psyr_2034 CDS
T00246
Name
(GenBank) Outer membrane autotransporter barrel
Organism
psb
Pseudomonas syringae pv. syringae B728a
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
Beta_helix
Opacity
Motif
Other DBs
NCBI-ProteinID:
AAY37077
UniProt:
Q4ZUU5
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Position
2359849..2362047
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AA seq
732 aa
AA seq
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MNAPFVLRPLSWTLKTVIFLSPLLPGSHAFAQILVNAPQTIDATGPLDSYRVVSTGNLTA
NGATTLQISTITGAKLTLTGSQVSAGTSSSAVSLTGADALIVGSVLTGGADGLGMGNESA
RLVGSTATVIGSTITATNRGINAGSLSNLTLEGTSVTATGANGRGMEMWDSTVKASGSTI
TGQQYGVRLRADPAVPSSNQLVLDGTRVEGITGSALIVGMPTGAPATADIRVNNGSTLTG
GNGRILELINGSTAHMTVDNSHLLGDVSADAGSTASLSLQNNATLTGRLENVSSLSLSSQ
GQWVMVENGQVNALAMDGGSVRFGDAASFYTLSLASLSGSGTFMMDVDFAGKANDFLDIT
GSATGSHTLLVGSTGVDPLSDTSLHVVHAAAGDASFSLAGGAVDLGAWSYDLIKQGDNDW
YLDTATRTISPGAQTVMALFNTAPTVWYGEVSTLRSRMGELRMDEARSGGWIRTYGNKFN
VADASGFGYQQVQSGVALGADGKLPVGAGQWLAGVMIGQSTSDLSLDHGASGKVDSYSLG
AYSTWLNSESGYYIDGVIKLNQFKNKARVNLSDGSRTRGNYDNLGVGASLELGRHIKLDN
GYFLEPYTQLAGLVVQGKDYALDNGMRAEGDRSRSLLGKVGTTAGRSFDLGKGRTLQPYV
RVAVAHEFVNRNEVKVNDNVFNNDLSGSRGELGTGVSVSLSDNLQLHADFDYSNGDAIEQ
PWGASAGLRYSW
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccattcgtgctgcgtccgctttcatggacattgaaaaccgttatttttctc
tctcccttgctgcctggcagtcatgcctttgcgcaaatacttgtcaatgcgccgcagacc
atcgatgcaacaggcccgctggacagttatcgggttgtcagcaccggaaatctgacagcc
aacggcgcgactaccctgcaaatatccacgatcaccggcgcgaagctgacgctcactggc
agtcaggtcagtgcgggcaccagctcttcagccgtatcgttgaccggggcagatgcgttg
attgtcggtagcgtgctgacaggtggcgcggatggcctggggatgggcaatgaaagtgca
cgactggtcggttccacggccaccgtcatcggcagcacgatcacggccacgaatcgcggg
ataaacgccggctcgctcagcaacctgaccctggaaggtacttcagtaacggccactggc
gccaatggcagaggcatggagatgtgggactccacagtgaaggcgtccggcagcaccatc
accgggcagcaatatggcgtgcgcttgcgcgctgacccggccgtaccctcaagcaatcag
ctggttctggacggaacccgggtcgaaggtatcacggggtcggcgctgatcgtcggaatg
cccaccggcgcgcccgcgactgccgatatccgggtcaacaatggttctacgctgaccggc
ggcaacggccggatactggagttgatcaacggttcaacggctcatatgaccgtggacaac
agccatctgctgggcgatgtatcggcggatgcgggcagtaccgccagcctgtcactgcaa
aataacgcgaccctgaccgggcgcctggagaacgtctccagcctgtcgctcagtagtcag
ggccagtgggtgatggtcgagaacggtcaggtgaatgcattggccatggacggtgggtcg
gtcaggtttggcgacgcggcctcgttttacacgttgtcactcgcaagcctgtcagggagc
ggtacgttcatgatggacgtggatttcgctggcaaggccaatgactttcttgacatcacg
ggcagcgcgaccggcagtcataccttgcttgtcggtagcacgggtgtcgatccgctcagc
gataccagcctgcacgtcgtgcatgcggcagccggcgatgccagcttttcgctcgcaggc
ggcgcagtggatctgggcgcctggtcctatgacctgatcaagcagggcgacaatgactgg
tatctggataccgccacccgaaccatcagccccggcgcacagactgtcatggcgttgttc
aacactgcgccgactgtctggtatggggaggtgagtacgttacgttcgcgcatgggcgag
ttgcgcatggatgaggcccgttctggcggctggatacgtacctacggcaacaaattcaat
gtggccgacgcctcaggcttcggatatcagcaggttcagagtggtgtcgcgctcggcgca
gatggcaagctgcctgtgggggcggggcaatggctggcgggcgtgatgatcgggcagagc
acctctgacctcagtctggatcacggtgccagtggcaaggtcgacagctattcgctgggc
gcttacagcacctggctgaacagcgagagcggctactacatcgatggcgtgatcaaactc
aatcagttcaaaaacaaggccagagtcaatctcagcgatggttcccgcacgcgcggcaac
tacgacaatctgggggttggcgcatcgctggagctggggcggcacatcaaactggacaac
ggttattttctcgaaccctacacccagctggcgggcctggtcgttcagggcaaggactac
gcactggacaacggtatgcgtgctgaaggtgaccgcagccgatcgctgctcggcaaggtc
ggtacgacggcggggcgcagtttcgacctgggcaaaggacgtacgctgcaaccttatgtg
cgggttgccgtggctcacgaattcgtcaacaggaacgaggtcaaggtcaatgacaacgtg
ttcaacaacgacctctccggttcccgtggcgaattggggacgggcgtttcggtgtcgctg
tctgacaacctgcagttgcatgctgatttcgattacagcaatggcgatgccatcgaacag
ccgtggggcgccagtgcaggcttgcgttacagctggtag
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