Pseudomonas syringae pv. syringae B728a: Psyr_2040
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Entry
Psyr_2040 CDS
T00246
Name
(GenBank) YD repeat protein
Organism
psb
Pseudomonas syringae pv. syringae B728a
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
AAY37083
UniProt:
Q4ZUT9
LinkDB
All DBs
Position
complement(2369211..2374259)
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AA seq
1682 aa
AA seq
DB search
MAASTSVHSNALNFMSCLKSGVDPRTGLYNISISLPDLQSNDLRGPGFRLDLSYSQLNTL
DSGYGLGWNMQLSQYDPATQILSLSTGETFRVDGTSSNGQLTMTEKKLDTFHFYKLDDES
YRVAHKSGLVEILELHSSGNKRMAWPVKIIAPSGHSIALKHTVFNSSTYRLASITDDLGQ
TLLKIARSTTSVELDLHPDEGTGDTPLARFLMTLAGSDKRVSRITLPTENKASWRFEYGL
ENGNQLCVRHVETPAGSSENVYYQDEGHAFPSSAGRMPVPRVTKHVIDPGLNQAKIDVRY
TYKDGQQRSRNFLGAGLPIAWEDNGLDNLYKYLQDYNYVCTESLWVDNKAVRSIERTFNR
FHLQTLEVTTQNKNQLTVTTAYNILQGEHYSRQPNDCQLPSEITTRWQRLDAPERTRTET
VTDTYDSYGNLLVHTRADGIEEVSSWYPAAGGDGCPADAEGFVSRLKEKVVKPAPSSQLG
APTLATRYRYQTLPALADSELPDWIVPESETLLQLESDGTCVELQKVLLEYINQPDAPFL
HGRTGKNIESLNGNDTVTVYEYSKSKSRQLEVPVQLIDITTIGFDNARISKQQQQSLLTG
QVLLTLEEGVEIRYVYDVLNRLTKETIAPDSSDEASREYLYTLCSAAGQQAEQVLVDARK
VKTRSVLDGLGRAILEERDHIDSNDLQAMRIIHTAQYNAWNNVQHETDYDWFANQQRFAT
RNTYAYDDWNVQCVITSDHGVQTHQYYDPIGNEEHKGPVQKTWVQSSDAEPLISGRSETW
LNMFGKPDKIKIKIKTQNADGEKDQGSQTFLYDGLGRCTEQTDASNHTTLFSYDAWSRMV
TTRLPDGSEAHRDYAPHSNTELPIGLKMMHSDGITNTLAGKQAFDGLGRLTLSQAGQRIE
QYEYEDGHRQVKTRKTAKGDDISYTYNLALTDQIVSSTAPDDTVGFGYDNVSARLTSATN
QQGKRVYAYDAHNQLTKETWKDLQGRTWKTVHRTSLQGRAMYRTDVEQKDVKNSVKGVVK
GRIKGGVKGVETIYRYDDFGRLENVVQGNVEVTILYDTLGQPSEMTTCDQAAGTRLVNRM
KYDDQGQEILRTQIAGNHPVRTLEQQWQTDGLMQSRHLQEAGNTLLLETFKYDARGRLTG
VIYSGSTLPVHASGRAILKQTFIFDSLDNMIQTTTEFADASTEMAFFHYGKEDDPDPLSR
DRCQLLGITYRPPRGTPDPTFRYDANGNQLDDEHGNRLYYDSQSRLLRVEKPAGEPISTY
AYDGHDHLATTRNGSDSEILRFYQDQQLSSTVQDDRRTQFLYIDEQPVGQQTIGEPAETL
LLLTDANQSVLAEFQQDKLRTAVYSAYGERHSDDALLSVAGFNGEICEKDTGWYLLGNGY
RAYNPGMMRFHSPDSLSPFGAGGVNPYTYCLGNPIAWRDPTGHDASSQSGRLRRPDEDAI
PAEMPGGMGIQTWIMLAVGIVFTAVGAYATVASFGLAAPGSVPVTVLGMTMTAQTAAYVA
TGLLAAGTVLGAASTAATTYGAVKGNETAFRLGEYLAYAAIPLDIAGGVFRSAVKSAIKA
ASKASSRRVSETASRVSVGTIDDSPVDSVTGTRRGSAPASMDAPGPVGGVRIPRVRVNRP
EPPTPNPRPESGPFARRARTPTDDPAAAPSSGPSRFAGRTVFLVRLRKLGENVFVLKYMP
RR
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttctacttccgtgcactccaacgcgctcaatttcatgagttgtctgaaaagc
ggcgttgacccacgcaccgggctatacaacatatcgatcagcttgcccgatctgcaaagc
aatgacctgcgcgggccagggttccgactcgacctgtcctacagccagctcaatacgctg
gacagcggctatggcctgggctggaacatgcagttgtcgcagtacgaccctgccactcag
atcctgtccctcagcacaggcgagaccttccgggtcgacggcaccagcagcaacggccaa
ctgacgatgacggaaaagaagctcgacaccttccacttctacaaactggacgatgagtct
taccgggtggcgcacaaatcaggtctggtggaaatcctcgagctgcacagcagcggcaat
aagagaatggcctggccggtgaaaatcatcgcgccgtcggggcacagcattgcgctcaag
cacacggtgttcaacagcagcacctacaggcttgcttcaatcactgatgacctgggtcag
acgctgctgaaaattgcccgcagcaccacctccgtcgagctggatctgcatccggacgaa
ggcaccggcgatactccgctggcgcgctttctaatgaccctcgcaggcagcgacaaacgc
gtatcgcgcatcaccctgcccaccgaaaacaaagcgtcgtggcgcttcgaatatggcctg
gagaacggcaatcaattatgcgtcaggcatgtggagacacctgctggaagcagcgaaaac
gtttactaccaggacgagggccatgcgtttccatccagcgccggtcgcatgcccgtgccc
agggtgacaaaacacgtcatcgatcccggcctgaatcaggcaaagatcgatgtgcgatat
acctacaaggacggccagcaacgctcacgaaactttctcggtgcagggttgcccatcgcc
tgggaggacaacggcctggacaatctctataaatatttgcaggactacaactatgtctgt
accgaaagcctgtgggtcgacaacaaggccgtgcgcagcatagagcggaccttcaaccgc
ttccacttgcagacccttgaagtcaccacccagaacaaaaaccagctgacggtcacgacc
gcctacaacatcctgcagggcgagcattactccagacagcccaacgattgtcagctaccc
agcgaaatcaccacccgctggcaacggctggacgcgcctgagcggacccgcacagagacc
gtcaccgatacctatgacagttacggcaacctgctggtgcatacccgcgccgacgggatc
gaagaagtcagcagctggtacccggccgccggtggcgacggttgcccggccgatgcggaa
gggtttgtctcccgactgaaagaaaaagtggtcaagcccgctccatcgtcgcagctcggg
gccccgaccctggccacacgttatcgctaccagacattgcctgcactggccgacagcgag
ttacccgactggatcgtgccggaaagcgaaacgctgctgcagcttgaaagcgatggaacc
tgtgtagagttgcagaaggtcctgctggagtacatcaaccagccggatgcgccattcctg
catggtcgaaccgggaaaaatatcgagtccctgaatggaaacgacaccgttaccgtctac
gagtacagcaagagcaagagcaggcaactggaggtcccggtacaactcatagacatcacc
acgatcggcttcgacaacgcccgcataagcaagcagcaacaacagtcgttgttgaccggt
caggtgctgctgaccctggaagaaggcgtggagatccgctatgtctatgacgtgctgaac
cggctgaccaaagaaacgatcgcaccggactcaagtgatgaagccagtcgcgagtatctg
tacaccctgtgttccgctgcggggcagcaggcagaacaagtgctggtcgacgcccgcaag
gtcaagacccgctctgttctggacggcctgggccgggcaatactcgaggagcgggaccac
atcgacagcaacgatctgcaagcgatgcgcataatccataccgcgcaatacaacgcttgg
aacaatgtgcaacacgaaacggattatgactggttcgccaaccagcaacggttcgccacg
cgaaacacctacgcctatgacgactggaacgtccagtgtgtcattacctcggatcacggc
gtacagacccaccagtactacgaccccatcggcaatgaagaacataaaggccctgttcag
aagacctgggtgcaaagcagtgacgcagaaccgctgatcagtggtcgcagcgagacctgg
ctgaacatgttcggcaagccggacaagatcaagatcaagatcaagacccagaacgcagat
ggagaaaaagatcagggttcacaaaccttcctctacgacggactggggcgctgcacggag
cagaccgacgcgtcaaaccacacaaccctgttcagttatgacgcctggtcgcgcatggtc
acaacacgcttgccggatggaagcgaggcgcaccgtgattatgcaccgcacagcaacacc
gagctgccgatcggcctgaaaatgatgcattcggacggcattaccaacactctggcaggc
aaacaggcgttcgacgggctgggtcgtctgacactgtcgcaggcagggcaacgtatcgag
cagtacgagtatgaggacggtcacaggcaggtcaaaacccgcaaaacggccaagggcgat
gacatcagctacacctacaacctggcactcaccgaccagatcgtctccagtactgcaccg
gatgacaccgtcggttttggctatgacaacgtcagcgcccgcctgacctctgccaccaat
cagcagggcaagcgcgtttatgcttatgacgcgcacaaccagttgaccaaagagacctgg
aaagatctacaaggccggacctggaaaaccgtgcatcggacatccttgcagggccgtgcg
atgtatcgcaccgacgtcgaacaaaaagacgtcaaaaactcggttaaaggcgtagtcaag
ggccgcatcaaaggtggcgtcaaaggcgtggaaacgatttaccggtacgacgatttcggc
cgactcgaaaacgttgtgcagggcaacgtggaggtgacaatcctgtatgacaccctgggt
cagcccagtgagatgacaacctgtgaccaggccgccggaacccgcctggtaaaccgcatg
aagtatgacgaccagggacaggaaattctcaggacgcagattgcaggcaatcacccggta
cgtacgctggaacagcaatggcaaaccgacgggctcatgcaaagccgtcacttgcaggaa
gcaggcaacacgctgctgctggaaacattcaagtatgacgctcgaggtcgtctgaccggc
gtcatctattcaggcagcacattgccagtgcacgcatccggcagggcgatactcaagcag
acgttcatcttcgactcgctggacaacatgatccagaccactaccgaatttgccgacgcc
agcactgagatggcctttttccactatggcaaagaggatgaccccgatcccctctccagg
gaccgatgccagttgctcggcatcacctacaggcctccacggggcacaccggacccgacg
ttccgctatgacgccaacggcaaccagctcgatgacgaacatggcaaccggttgtactac
gacagccagagccgccttttacgggtggagaaaccggcgggtgagccgatcagcacatac
gcttacgacggccatgatcatctggccaccacccgcaatggcagtgacagcgaaatactg
cgtttttatcaggaccagcagttgagcagcacggtgcaggacgaccgacgtactcagttt
ctgtacatagacgagcaacccgtcggccagcagaccatcggagaaccggcagaaaccctg
ctgttgctgacggatgcgaaccagagcgtgctcgctgagttccagcaggacaagctgcga
acagcggtctacagcgcctacggagaacgtcacagcgatgacgcgctgctcagcgtcgca
gggttcaacggcgaaatatgcgaaaaagacacgggctggtatctgctgggcaatggctac
agagcctacaaccccggcatgatgcgttttcacagccctgattccttgagcccctttggt
gcaggcggggtcaacccctacacttattgcctgggcaatcccattgcctggcgcgacccc
accgggcatgacgccagctcccagagcggccggctgcgaaggcccgatgaggatgcgata
cctgcagagatgccggggggcatgggaatacagacctggatcatgctcgcggttggcata
gtgttcacggcagtgggtgcctacgcgacagttgcatcgtttggattggccgcgcccggc
tcggttcctgtaacggtcctgggtatgacgatgaccgcacagacggcggcctacgtcgca
acagggttgctggcggcagggaccgttctgggggctgcatcaacggctgccactacttat
ggtgcggtgaagggaaacgagacagcctttcggttaggggaatacctggcctatgccgcg
atacctttagacatcgctgggggggtattcagaagtgcggttaaaagcgcgatcaaggct
gcgtccaaggcttccagccggcgagtttccgagacagcgagtagagtttcagtcgggacg
attgacgattcaccggtcgattctgtaacgggtacgcggcgtggatctgctccagcgagt
atggacgcacccgggcctgttgggggtgtgaggattccaagagtgcgggtgaacaggcct
gaaccacctacaccgaaccctcggccggagagcggccctttcgccaggcgcgcgcggaca
ccgacagatgaccctgcagcagcaccgtccagcggtccgtcacggtttgcgggcagaacg
gtttttttagtacggcttcgcaaactcggggaaaacgtcttcgtgcttaaatacatgcct
cgccggtga
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integrated database retrieval system
