Pseudomonas syringae pv. syringae B728a: Psyr_2282
Help
Entry
Psyr_2282 CDS
T00246
Name
(GenBank) Hydrophobe/amphiphile efflux-1 HAE1
KO
K18296
multidrug efflux pump
Organism
psb
Pseudomonas syringae pv. syringae B728a
Module
psb_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_2282
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_2282
Transporters [BR:
psb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Psyr_2282
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
Psyr_2282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AAY37325
UniProt:
Q4ZU47
LinkDB
All DBs
Position
complement(2650482..2653625)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSLFFIKRPNFAWVLALFILLAGLMALPSLPVAQYPDVAPPQITITATYPGASAKVLVDS
VTSVIEDELNGAKGMLYYESTSNSTGSAEINVTFVPGTNPDLAQVEVQNRIKKAEARLPQ
TVLSQGLQVEQASSGFLLIYTLNYKDGAASKDTVALADYAARNVNNEISRVNGVGRLQFF
AAEAAMRVWIDPQKLVGFGLSIDDVNAAIRAQNVQVPAGSFGSSPASSLQELTATLAVKG
TLDNPEEFGRIVLRANEDGSAVHLSDVARVAVGSQDYSFESRLNGQRAVAGAVQLSPGAN
AIQTARAVEQRLTELSVNFPEGVGFSIPYDTSRFVDVAIDKVIYTLIEAMVLVFLVMFLF
LQNIRYTLIPTIVVPVCLAGTLAIMYLMGFSVNMMTMFGMVLAIGILVDDAIVVVENVER
IMAEEGLSPAAATVKAMQQVSGAIFGITLVLAAVFLPLAFMGGSVGVIYQQFSLSLAVSI
LFSGFLALTFTPALCATLLKPIPAGHHEKRGFFGGFNRLFGKFTHRYERVSSSMIKRAGR
YMLLYVGIVGLLGFFYLRLPESFVPVEDQGYLIIDVQLPPGATRSRTDLTAQLLENYMLS
REATGAVTMLLGFSFSGMGENAGLAFPTLKDWSERAKGQSAAEEAVAFNQHFAGLGDGTV
MAVTPPPIDGLGTSGGFSLRLQDRAGLGREALLAARDKLLGEANGNPKILYAMMEGLAEA
PQLRLSIDREKARALGVSFESINNALSTAFGSSVISDFANAGRQQRVVVQAEQSARMTPE
SVLKLYVPNSSGTLVPLGAFVSTHWEQGPVQIARYNGYPAFRISGDAAPGVSTGEAMAEI
ERIVSKLPQGIGYEWTGLSYQERVASGQAAGLFGLALLVVFLLLVALYESWAIPLVVMLI
VPVGALGSVLAVTAVGMPNDVYFKVGLITIIGLAAKNAILIVEFAKELWDQGHSLRDAAL
QAARLRFRPIVMTSLAFILGVVPLTLATGAGAASQRAIGTGVIGGMLSATLLGVVLVPIF
FVWVLSVLRRKPHAQQANEDQQLPEKR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcttctttatcaagcgccccaacttcgcctgggtactcgccctgttcatcctg
ctcgccgggctgatggcgctgccgtccctgcccgtggcgcagtatccggacgtggcgcca
ccgcagatcaccatcaccgcgacctaccccggcgcatccgcgaaagtgctggtcgattcg
gtgaccagcgttatcgaggacgagctcaacggtgccaaggggatgctgtattacgagtcg
accagcaactcgaccggcagcgcggaaatcaacgtgacgttcgtgccgggcaccaacccg
gacctggctcaggtcgaggtgcagaaccgtatcaagaaagccgaagcgcgcctgccgcag
acggtcctcagccagggcctgcaggtcgaacaggccagctccggttttctgttgatctac
accctgaactacaaggacggcgcggccagcaaggatactgtcgcgctggccgactacgcg
gcacgcaacgtcaataacgaaatcagccgggtgaacggtgtcggcaggctgcaattcttc
gccgccgaagccgcgatgcgggtctggatcgatccgcagaagctggtgggcttcggcttg
tccatcgacgacgtgaatgccgccatccgggcgcagaacgtgcaggttccggcaggcagc
ttcggtagcagcccagcctcgtcactgcaggaattgacggcgaccctggcggtcaagggc
acgctggacaacccggaagagttcgggcgcatcgttctgcgtgccaacgaagacggctct
gcggtgcacctgtccgatgtggcgcgtgtggcggtcggcagccaggattacagcttcgaa
tcacgcctgaacgggcaacgcgccgtcgccggtgccgtgcaactgtcgccgggtgccaac
gcgatccagacggccagagccgtcgagcagcggctcaccgagctatcggtcaatttcccg
gaaggcgtcgggttttcgataccgtacgacacctcgcgcttcgtcgacgtggccatcgac
aaggtcatctacaccctcatcgaagccatggtgctggtgtttctggtgatgttcctgttt
ctgcaaaacatccgttacacgctgatcccgaccatcgtggtcccggtgtgtctggcaggg
acactggcgatcatgtacctgatgggcttctcggtgaacatgatgaccatgttcggcatg
gtgctggccatcggtattctggtcgacgacgccattgtggtggtggagaacgtcgagcgg
atcatggctgaagaaggcctctctcccgccgccgccacggtcaaggcgatgcagcaggtt
tccggagcgattttcggcatcacgctggtcctggccgccgtgtttctgccactggcgttc
atgggcggctcggtcggggtcatctaccagcagttctcgctgtcgctggccgtgtcgatt
ctgttttcgggtttcctggccctgacgttcaccccggcgctgtgtgccacgctgctcaag
ccgatcccggccgggcaccatgaaaagcgtggtttcttcggtggtttcaatcgtctgttc
ggcaagttcacccaccgttacgagcgcgtcagttccagcatgatcaagcgcgccggacgc
tacatgctgctgtacgtcggtatcgtcggtctgctgggctttttctacctgcgcctgccg
gagtcctttgtacccgtggaagatcagggctatctgatcatcgacgtgcaactgcctccc
ggtgccacccggtcgcgtaccgacctcaccgcgcaattgctcgagaactacatgctgtcc
cgtgaagccacgggcgcggtgaccatgctgctggggttcagcttctcgggcatgggtgaa
aacgccggtcttgcgttcccgaccctgaaggactggtcggagcgcgccaagggccagtcg
gcggctgaagaagcggtggcgttcaaccagcattttgccgggcttggcgacggcacggtg
atggcggtaacgccaccgcccatcgacggcctgggcacctcgggcggtttctcgctgcgt
ctgcaggaccgcgctggcctgggccgtgaagccttgctggcggcacgcgacaagctgctc
ggcgaggccaacggcaatccgaagatcctctacgcgatgatggaaggtctggccgaagcg
ccgcaattgcgcctgagcatcgaccgcgaaaaagcccgggcgcttggcgtgagtttcgag
tcgatcaacaacgccctgtccaccgccttcggatcctcggtgatcagtgactttgccaat
gccggacgtcagcagcgcgtggtcgtgcaggccgagcaaagtgcgcgaatgaccccggaa
agcgtgctcaaactctacgtgcccaatagcagcggcacgctggtgccgttgggtgccttt
gtttcgacgcactgggaacaaggcccggtgcagatcgcccgctacaacggctaccccgcg
ttcaggatttccggcgacgcagcgccgggggtcagtaccggcgaggccatggcggaaatc
gaacggatcgtttccaagctgccgcaaggcatcggttacgaatggaccggcctctcctat
caggaaagagtcgccagcggccaggcggccggactgttcggcctggcgctgctggtggtg
tttctgctgctggtcgcactgtatgagagctgggcgatcccgctggtggtgatgctgatc
gtacccgtcggcgcgttgggttccgtgctggccgtgacagccgtgggcatgcccaacgat
gtgtatttcaaagtcggcctgatcaccatcatcgggctggcggcgaaaaacgcgattctc
atcgtcgagttcgccaaggagctgtgggatcagggccattcactgcgcgacgcggcgctt
caggctgcgcgactgcgctttcggccgattgtcatgacctcgctggccttcatccttggc
gtggtgccgctgaccctggctaccggcgcgggggcggcgagccagcgcgccatcggcacc
ggcgtcatcggcggcatgctcagcgcgacgctgctgggcgtggttctggtgccgatattc
ttcgtctgggtcctgtccgtgctgcgccgcaaaccgcatgcgcaacaggctaacgaagac
cagcagctgcctgagaagcgctag
DBGET
integrated database retrieval system
