Pseudomonas syringae pv. syringae B728a: Psyr_2284
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Entry
Psyr_2284 CDS
T00246
Name
(GenBank) transcriptional regulator, LacI family
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
psb
Pseudomonas syringae pv. syringae B728a
Module
psb_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psb03000
]
Psyr_2284
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_2284
Transcription factors [BR:
psb03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Psyr_2284
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
Psyr_2284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
TetR_N
HTH_6
HTH_Tnp_ISL3
HTH_IclR
Xre-like-HTH
HTH_31
HTH_26
TetR_C_29
HTH_29
HTH_3
DUF134
Motif
Other DBs
NCBI-ProteinID:
AAY37327
UniProt:
Q4ZU45
LinkDB
All DBs
Position
2654958..2655548
Genome browser
AA seq
196 aa
AA seq
DB search
MRRLPLRRVEDVPMELPADDKFLKALAVALVDHSNGTLKDIAQAAGVSKATLNRFCGTRA
NLVELLLNHASDLMNQMVADADLQHAPPLEALQRLVDNHLMHREMLVFLVFQWRPDSLDE
SSGGRRWLPYSDALDAFFLRGQREGLFRIDVGAAVLTEMFAALLSGMVDAERRGRVARVG
MGALVTQFFLQGAAAR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcctgccacttagacgagttgaagacgtaccaatggaattacctgctgacgac
aaatttctgaaggccctggccgttgcgctggttgaccattccaacggtacgctcaaggat
attgctcaggcagctggcgtcagcaaggcgacgctcaaccgcttctgcggcacccgcgcc
aacctcgtggaactgctgctcaatcacgcctcggacctgatgaaccagatggtcgccgac
gcggatctgcagcatgctccgccgctggaagcgcttcagcggctggtcgacaaccacctc
atgcaccgcgaaatgctggtctttctggtattccagtggcgcccggattcgctcgatgaa
agcagcggtgggcgccgctggttgccttactccgacgccctcgatgcgtttttcctgcgc
ggtcagcgtgaaggtctgttccggatcgacgtcggtgccgctgtccttaccgaaatgttc
gcagcgctgctctccgggatggtcgacgccgaacgccgcggccgtgtggcacgcgtcggc
atgggcgctttggtgacccagtttttcctgcagggcgcggcggcacgataa
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