Pseudomonas syringae pv. syringae B728a: Psyr_2398
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Entry
Psyr_2398 CDS
T00246
Name
(GenBank) ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psyr_2398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_2398
Transporters [BR:
psb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Psyr_2398
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Ortholog
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
DUF2158
RsgA_GTPase
MIT_C
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AAY37437
UniProt:
Q4ZTT5
LinkDB
All DBs
Position
complement(2780195..2781349)
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AA seq
384 aa
AA seq
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MSAVIKDPAHQPHNTLVSLCNLNKHYGNFAAVDDISLDIQDGEFLTFLGSSGSGKSTTLS
MLAGFETPSSGEILVGGKSLVNVPPHKRDIGMVFQRYSLFPHLSVRDNIAFPLAIRKLPA
AEREKKVDAMLKLVQLEAFAHRRPSQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKK
LREDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGSGYDLYQDPPN
AFVASFLGNSNFLRLKAQGNAVATFEGSTLAIRLTAGLKTDQEVLLMVRPEKAQALSVSQ
AAAMPLEAGWNEVNATVAEVLFLGESQTCSVVSAGGTAMTVKALSANGMALKAGDPVRVR
WAAADACIYTEWTDSDLNKAAGTH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgtgatcaaagaccccgcccatcagccacacaacacactggtcagcctgtgt
aatctgaacaagcactatggaaatttcgccgccgtcgacgacatttccctggacatccag
gacggcgaattcctgaccttcctgggctccagcggctcgggaaaaagcaccacgctgtcg
atgctcgccggcttcgaaacgcccagctcgggcgagattctggtgggtggcaaatcgctg
gtgaatgtgccgccacacaagcgcgacatcggcatggtgtttcagcgctactcgctgttc
ccgcacctgtcggtacgcgacaacattgccttcccgctggcgatccgcaagctgcctgcg
gccgagcgcgagaagaaagtcgatgcgatgctcaagctggttcagctggaagcctttgct
catcggcgcccgtcgcaactgtcaggcggccagcagcagcgggtcgccatcgcccgagcg
ctggtttacgagccgcgcatcctgctgatggacgagcctctgggcgcactggacaagaag
ctgcgcgaagacctgcaggacgaactgcgccagttgcatcgccggctgggcatcaccatc
gtttacgtaacccatgatcaggaagaagccatgcgcctgtcacagcgcatcgccattttc
agccatggcaagatcgtcggtctgggctcgggctatgacctgtatcaggatccgccgaat
gccttcgtcgcctcgtttctcggcaactcgaacttcctcaggctcaaggcccagggcaat
gccgtggcaaccttcgaaggcagcacactggcgattcgcctgaccgcagggctgaagacc
gatcaggaggtgctgctcatggtgcgcccggagaaagcccaggcgctgagcgtgtcccag
gcagcggccatgccgcttgaagcaggctggaacgaggtaaacgccacggttgctgaagtg
ctttttctcggcgagagccagacatgctcggtggtctcagccggaggcactgccatgacg
gtcaaagcgctttctgcgaacggcatggcgctcaaggcgggcgacccggtgcgcgtgcgt
tgggccgcggcagacgcgtgcatctacaccgagtggaccgacagcgacctgaacaaggcc
gccggcacgcactga
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