Pseudomonas syringae pv. syringae B728a: Psyr_2580
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Entry
Psyr_2580 CDS
T00246
Name
(GenBank) Sigma-70 region 2
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psyr_2580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psb03021
]
Psyr_2580
Transcription machinery [BR:
psb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psyr_2580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_11
DUF6362
PhyR_sigma-like
RovC_DNA-bd
HTH_24
HTH_38
HTH_7
HTH_40
HTH_36
HVO_A0261_N
TnsD
HTH_28
HTH_29
Xre-like-HTH
HTH_Tnp_ISL3
HTH_31
HTH_AsnC-type
HTH_Mga
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AAY37619
UniProt:
Q4ZTA3
LinkDB
All DBs
Position
3022000..3022509
Genome browser
AA seq
169 aa
AA seq
DB search
MTDAATLSQQTLHSLYRDHHGWLESWLRRRMGNAWDAADLSQDTFLRVLSSSQQIADMQE
PRAYLLTVGKRLLSNFYTRRSLEQAYLEALAQLPEESVPSPEQRWLLLETLQALDELLDG
LSAVVRRAFLWSQLEGLGYREIAERLSVSERTVKRYMAQAYEHCLLVDW
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcagcgacgctatcacagcagaccttgcattccctgtaccgcgatcatcat
ggctggctggaaagctggctgcgcagacgcatgggcaatgcctgggatgctgctgacctg
agtcaggatacgtttctgcgcgtgctgtccagctcccagcagatcgccgatatgcaggag
ccgcgtgcctatctgctgacagtgggcaagcgcctgctcagtaatttctacactcgtcgc
agccttgaacaggcttatctggaagcgctggcgcagttgcctgaagaaagcgtgccgtcg
ccggagcagcgctggttgctgctggaaaccctgcaggcgctggacgagctgctcgatggc
ctgtcggcagtggtgcgccgggcgtttctctggagtcagctcgaggggctgggctatcgg
gaaatcgctgaacgcctgagtgtttccgaacgcaccgtcaaacgctatatggcacaagcc
tacgagcactgtctgttggtggactggtga
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