Pseudomonas syringae pv. syringae B728a: Psyr_2997
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Entry
Psyr_2997 CDS
T00246
Name
(GenBank) Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00500
Starch and sucrose metabolism
psb01100
Metabolic pathways
psb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Psyr_2997
Enzymes [BR:
psb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Psyr_2997
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AAY38031
UniProt:
Q4ZS41
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Position
3592521..3594704
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AA seq
727 aa
AA seq
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MNTKSTTPAEDNSAPLDNPGSTPSRIREGLPFPLGASWDGLGVNFALFSANATKVELCLF
DSTGEIELERIELPEYTDEIYHGYLPDAHPGQIYGYRVYGPYDPKNGHRFNHNKLLIDPY
AKQLVGELKWSEALFGYTIGHPDGDLSFDERDSAPFVPKSKVIDEAYTWGRDQRVGTPWD
KTIFYETHVRGITMRHPEVAEELRGTFAGLGSAPVVEHIRKLGVTSVELLPIHAFVNDQH
LLQKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHHAGLEVILDVVYNHTAEGN
ELGPTLSMRGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMH
VDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLVAEPWDCGPGGYQVGGFPPG
WMEWNDKFRDTVRAFWKGDEAQLADFAARMTASGNMFNQRGRRPQASVNFITAHDGFTLH
DLVSYNDKHNEANDENNQDGSNNNLSWNHGVEGPTEDPEINSLRLRQMRNFFATLLLAQG
TPMIVAGDEFARTQHGNNNAYCQDSEIGWINWDLDEDGEALLKFVTRVIKLRQTYPILRR
SRFLVGDYNEEIGVKDVTWLAPDGNEMSVEQWHDANGRCLGMLMDGRAQETGIRRAGADA
TLLLVVNAHHDGVNFTLPEVPEGTHYECLIDTNQDDARSKEHFAFGSQYTVTPRSLLLFE
LKREDQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagtccactacaccggcagaagataattcagccccgctagacaaccctggc
agtaccccgtctcgcattcgtgaaggacttccctttcctctcggtgcaagctgggatggc
ctgggcgtcaacttcgccctgttctcggcaaacgccaccaaggtagagctgtgcctgttc
gactccactggcgaaatcgaactggaacgcatcgaacttccggaatacaccgacgagatt
taccacggctatctgccggatgcgcacccgggccagatctacggctatcgcgtgtacggc
ccgtacgatccgaagaatggtcatcgtttcaaccacaacaagctgctgatcgacccgtac
gccaagcaactggtcggcgaactgaagtggtcggaagcgctgttcggttacaccatcggc
catcctgacggcgacctgagcttcgacgagcgcgacagcgcccctttcgtaccgaaaagc
aaggtgatcgatgaggcctacacctggggccgtgatcagcgcgttggcacgccttgggat
aaaacgattttctacgaaacccacgtacgcggcatcaccatgcgtcaccctgaggtggcc
gaagagctgcgcggcacgttcgccggtctcggatcagcgccggtcgtcgagcacattcgc
aagctgggtgtgacctccgtcgagctgctgccgattcatgccttcgtcaacgaccagcat
ttgctgcaaaagggcatgaccaactactggggctacaacagcatcgcgttcttcgccccg
gacccgcgttacctggcaagcggcaagattgccgagttcaaggaaatggttgcgcacctg
caccacgccggtctcgaggtcatcctcgatgtggtctacaaccacaccgccgaaggcaac
gagctgggccctaccctgtcgatgcgtggtatcgacaacgcctcgtactaccgcctgatg
ccggacgacaagcgctactacatcaacgactcgggcactggcaacaccctcgacctgagc
cacccttgcgtattgcaaatggtcaccgactcgctgcgctactgggcttcggaaatgcac
gtcgacggcttccgcttcgacctggcgaccattctgggccgctaccacgatggtttcgac
gagcgccacagcttcctggtcgcctgccgtcaggatccggtgctgcgtcaggtcaaactg
gtcgccgagccgtgggactgcggtccgggcggctaccaggtgggcggtttcccaccaggc
tggatggaatggaacgacaagttccgcgacacggttcgtgccttctggaaaggcgacgaa
gctcaactggccgacttcgctgcgcgcatgactgcctcgggcaacatgttcaaccagcgc
ggtcgtcgtccgcaggcatccgtgaacttcatcactgctcacgatggtttcacgctgcat
gacctggtgtcgtacaacgacaagcacaacgaagccaacgacgaaaacaaccaggatggc
agcaacaacaacctgtcctggaaccatggcgtcgaaggtccgaccgaagatccggaaatc
aacagcctgcgtctgcgccagatgcgtaacttcttcgccaccctgctgctggcacaaggc
acgccgatgattgttgcgggcgacgagttcgcgcgcactcagcacggcaacaacaatgcc
tactgccaggacagcgagattggctggatcaactgggatctggacgaagatggcgaagcg
ctgctcaagttcgtcacccgcgtgatcaagctgcgtcagacctacccgatcctgcgtcgc
agccgcttcctggtaggcgactacaacgaagagatcggcgtcaaggacgtcacctggctt
gctccggatggcaacgagatgagtgtcgagcagtggcacgatgccaatggccgttgcctg
ggcatgctgatggatggtcgcgcacaggaaaccggtatccgtcgcgcgggtgccgacgcc
acgctgttgctggtggtcaacgcgcatcacgacggcgtcaacttcaccctgccggaagtg
cctgaaggtacccattacgagtgcctgatcgacaccaatcaggatgatgcacgcagcaag
gagcactttgcgttcggttcgcaatacaccgtaacgccgcgttccctgctgctgttcgaa
ctgaagcgtgaagaccagcaatga
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