Pseudomonas syringae pv. syringae B728a: Psyr_3076
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Entry
Psyr_3076 CDS
T00246
Name
(GenBank) Type I secretion system ATPase, HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02010
ABC transporters
psb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Psyr_3076
03070 Bacterial secretion system
Psyr_3076
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_3076
02044 Secretion system [BR:
psb02044
]
Psyr_3076
Transporters [BR:
psb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Psyr_3076
Secretion system [BR:
psb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Psyr_3076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_18
AAA_29
AAA_30
DUF87
PRK
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AAY38110
UniProt:
Q4ZRW2
LinkDB
All DBs
Position
complement(3678036..3680198)
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AA seq
720 aa
AA seq
DB search
MNDSEMGTQMPDNAPRLDTGLASLVMLARFHQVAASPEQLAHEFGSPDQYLSQDSLLLAA
RKLGLKAKAARTTTERLDRTPLPAIAADNNGGFFIIARLDQGKALIHDPFSQRPEVVTFE
ALQERWTGQLLLIRSEAGTPGESSSFDFTWFIPAIVKYRKLLGEVMLVSFVLQIFSLITP
LFFQVVMDKVLVHHGLTTLDVIAIGLAGVMLFESALSGLRTYVFAHTASRIDVELGSKLF
RHLITLPLSYFQARRVGDSVARVRELENIRNFLTGNAITLLLDVLFSVVFIAVMFYYSGW
LTLIVLLSLPLYILVSVLITPVLRKRLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQA
IRKWDNQLAGYVAAGFKTQNLSTIANESVSLIGKLVTVATLWFGARLVIDGQLSVGQLIA
FNMLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRNELSQVNRSALPPIKGRIEFD
QVHFRYRPDGSEILRGINLVITPGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGM
DLALADVSSLRRQIGVVLQDNMLFNRSIRENIALSDAGAPLEAVMQMAKLAGAHDFILEL
PEGYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIVQQNMQAI
CKGRTVIIIAHRLSAVRDANRIVVVDRGQIVEQGTHAELLTHQAGHYSRLHRLQQGGSHV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcggaaatgggcactcaaatgcctgacaatgcccctcgcctggacaccggc
cttgcctcgctggtcatgcttgcgcgctttcatcaggtggcggcttcgccagagcaactt
gcccatgagtttggcagccctgaccagtatctgtcgcaggacagcctgttactggcggcc
cgtaaactcggcttgaaagccaaggctgcgaggaccaccaccgagcgtttggaccgtaca
ccacttcccgcgatagcagcggacaataacggtggtttcttcatcatcgcgcgtcttgat
caaggcaaggcgcttatccacgaccctttttctcaacgccccgaggttgttactttcgag
gccttgcaggagcgttggacaggccagttactgctcattcgctcggaggccggaacgccg
ggcgagtcttcaagtttcgatttcacctggttcattcctgccatcgtcaagtaccggaag
ttgctgggcgaagtgatgctggtttccttcgtcctgcaaattttctcgctgatcacaccg
ctgttcttccaggtagtgatggacaaggtacttgtccatcacggattgaccaccctcgac
gttatcgccatcggccttgccggggtgatgctgttcgagtcggccttgtctggcttgcgc
acctacgtgttcgcacacaccgccagccgcatcgacgtagagctgggttcgaagctgttt
cgtcacttgatcacgttgccgctctcgtactttcaggctcgccgcgtgggcgattcggta
gcacgggtgcgtgaactggaaaacatccgcaacttcctgaccggcaatgccatcaccctg
ttgctggatgtgctgttctcggtggtgttcattgcggtgatgttttactacagcggttgg
ttgacgttgatcgtgctgttgtccctgccgctctacattctggtgtcggtgctcattact
cctgtgttgcgcaaacgccttaacgacagttttgcccgaggcgctgagaaccaagcgttt
ctggtcgaaacggttaacggcatcgacacccttaaatcgatggcagtggagcctcaagcc
attcgcaagtgggataaccagttggcgggctatgtcgcagccggattcaaaactcagaac
ctgtcgaccattgccaacgaaagtgtctctctgatcggcaaactggtgactgttgcaacc
ctgtggtttggcgcgcgtctggtgattgacggccaactttcggtcggtcagttgattgca
ttcaacatgctcgccgggcgtgttgcccagccgatcatgcgccttgcgcaactgtggacc
aacttccagcagaccggcgtatcggtgcagcgcctgggcgacatcctcaatacccgtaac
gaactctcgcaagtcaaccgcagtgcgttaccgccgatcaaggggcgcatcgagtttgat
caggtgcatttccgctatcgcccagacggctcggagatcctgcggggcatcaatcttgtt
atcacgccaggccaggtcatcggtgtggtggggcgttccggctctggcaaaagcacactg
acgcgtctgttacagcgcctttatgtaccggagcgcggtcgggtgttggtagacggcatg
gatctggccctggcagacgtctcttccctgcgccgccagatcggcgtggtactgcaagac
aatatgctgttcaaccgcagcattcgcgaaaacatcgccttgagtgatgccggagcgcct
ttggaagccgtgatgcaaatggccaaactggctggcgcccacgacttcatccttgagctg
ccggagggctacgacacaatggtcggtgagcacggtgcgtcgttatccggcggtcagcgc
caacgtatcgctatcgcccgcgccctgatgggcaacccgcgcatcctgattttcgacgag
gccaccagtgcgctggactatgagtccgagcgcattgttcagcagaacatgcaggccatc
tgcaaggggcgcacggtgatcatcatcgcgcatcggctgtctgccgttcgcgatgccaac
cgcatcgttgtagtcgatcgcgggcaaattgtagagcagggcactcatgccgaattgctc
acacatcaagcaggtcattactcgcgccttcatcgcctgcagcagggaggcagccatgtc
taa
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