Pseudomonas syringae pv. syringae B728a: Psyr_3161
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Entry
Psyr_3161 CDS
T00246
Name
(GenBank) Type I secretion system ATPase, PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Psyr_3161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_3161
02044 Secretion system [BR:
psb02044
]
Psyr_3161
Transporters [BR:
psb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Psyr_3161
Secretion system [BR:
psb02044
]
Type I secretion system
Multiple protein transporter
Psyr_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_25
nSTAND1
nSTAND3
AAA_30
DUF87
AAA_33
AAA_29
SbcC_Walker_B
RsgA_GTPase
DUF1270
NACHT
STAS
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAY38193
UniProt:
Q4ZRM9
LinkDB
All DBs
Position
complement(3788885..3790681)
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AA seq
598 aa
AA seq
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MSALPQSARPPLYKALADYKSALIGVGCFTALINVLMLAPSIYMLQVYDRVLTSQNQTTL
AMLTLMVVGFFAFIGLLEMVRSFVVIRIGSELEKRFNLRVYQAAFESNLHAGQRQAGQAL
GDLTFIRQFLTGPALFAFFDAPWFPIYLAVIFLFDPWLGVLASVGTVLLVGLACLNEWLT
RKPLAEASGYSQQSAQLATRHLQQAEAIQAMGMLEVLRRRWFHVHGRFLALQNRASDTGA
VISSISKALRLCLQSLVLGLGALLVINGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWS
SARLAYGRLDQLLKTYAEPAPRMPLPAPRGQISAEQVSAAPPGKTSPTIQQVSFQLQAGE
VLGVLGASGSGKSTLARVLVGVWPALGGTVRLDGADMHRWDREALGPYIGYLPQDIELFG
GSVAENIARFREGDASAVVAAAQLAGVHELILRLPQGYDTRLGDDGAGLSGGQKQRVALA
RALYGDPRLVVLDEPNSNLDAAGEAALTQAIAELKTRGCTVVLVTHRTQSLNQTDRLLVL
SEGRMQAFGATAQVLQALSGQPSSTQAPQAQPQSQSRPAPAGLSMSRQYGTQNRQSDV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgttgccccaaagcgcccggccgccgctttataaagcgctggctgactacaag
agcgcgttgatcggtgtcggttgttttaccgcgctgatcaacgtgctgatgctcgcccca
tcgatttacatgctgcaagtctatgaccgcgtactgacctcacagaaccagaccaccctg
gccatgctgacgctgatggtggtcgggttctttgcgtttatcggcctgctggagatggtc
cgcagctttgtggtgatccgcatcggcagtgagctggaaaagcgtttcaatctgcgcgtc
tatcaggctgcgttcgagagcaacctgcacgccggacagcgtcaggctggacaggcgctg
ggtgacttgactttcatccgccagtttctcaccgggccggcgttgttcgcgttcttcgac
gccccgtggttccccatctacctggcggtgatcttcctttttgacccttggcttggcgtg
ctcgccagcgtaggcacggtgttgctggtcggactggcgtgtctcaacgaatggctgacc
cgcaaaccgctggccgaagccagcggctactcgcagcagtctgcgcaattggcgacccga
cacctgcaacaggccgaggcgatccaggcgatgggtatgctcgaggtcttgcggcgccgc
tggtttcatgtgcatgggcgctttctggccctgcaaaaccgagccagtgatacgggagcg
gtgatcagttcgatcagcaaggccctgcgtctgtgcctgcagtcgctggtgctgggcttg
ggcgcactgctggtgataaatggagacatgaccgccggcatgatgatcgccggttcgatc
ctcatgggtcgggttctgagccctatcgaccaactgatcgccgtctggaagcaatggagt
tctgcacgcctggcttatgggcgcctcgaccagttactcaagacctacgccgagcccgcg
ccgcgcatgccgctgccggcaccgcgcggtcagatcagtgcggaacaggtcagcgctgcg
cctcccggcaaaacgtcaccgacgattcagcaagtgagctttcagttgcaggccggtgaa
gtgctcggcgtgctgggcgcatccggctccggcaaatcgaccctggcacgcgtgctggtc
ggtgtctggccggcgctgggtggaacggtacgtctggacggggccgacatgcatcgctgg
gaccgagaggcgctgggtccctatattggttatctgccgcaggatatcgagctgttcggt
ggcagcgtggcggaaaacatcgcgcgctttcgcgagggtgacgcgagtgccgtggtcgct
gccgcgcaactggcgggcgtacacgaattgattctgcgcctgccgcaaggctacgacacg
cggctgggcgatgatggcgcaggcttgtccggtggtcagaaacagcgcgtcgcgctggcc
cgtgcgctgtatggcgatccgcgactggtggtgctcgatgagcccaattccaatctggat
gccgcgggtgaagcggcgctgactcaggcgattgctgaactcaagacccgcggctgcacc
gttgtgctcgtcacccaccgtacgcagtcgctgaaccagaccgatcgtctgctggtgctg
agcgaaggtcgcatgcaggcattcggcgccacggctcaggtgctgcaggccttgtcgggg
cagccatcgtccacacaagcaccgcaagcgcagcctcaatcgcaatcccgcccggcacct
gccgggctttccatgagccgtcagtacggcacgcagaacaggcagtccgacgtatga
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