Pseudomonas syringae pv. syringae B728a: Psyr_3304
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Entry
Psyr_3304 CDS
T00246
Name
(GenBank) Lipopolysaccharide biosynthesis
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
Psyr_3304
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Gene cluster
GFIT
Motif
Pfam:
GNVR
Wzz
Bacillus_HBL
dCMP_cyt_deam_2
Motif
Other DBs
NCBI-ProteinID:
AAY38336
UniProt:
Q4ZR86
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All DBs
Position
3953610..3955601
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AA seq
663 aa
AA seq
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MINIRSFRDLLRLLFIFLREVRITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTV
PIELSDRQAIVIPSGLRDPLLDEERMLSGRPIMRAVSEKYLAELSMVPPETGVLASVKNG
IKTVVGALVNGVRSVLQFIGLVEHRSQAERLAEDLEKNFKVSHEPGSSVMELRFTWSDPE
VAQTVLRTWITEYQTQRTKTLGRVSLYAFYEAEVKTTGANIIEYKKQIQNYLNQLSAVSI
SQRLADTSQALNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQD
LQNRINGKEVERQEMLRSFKDEAPPIRAINEEVSNLKKLLKEQDATVQRSESITPNPIYN
RMQNVYADQQTSYARLQTQFIQQNEQIAQLERDRQQALNLEPELSRLQNELDAAEKSYAL
YKNSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLFLAFPLSVVVGAVALYF
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAALTSNLHRVYGILPLDQVEERGL
TIGFTSVKYGAGVSFVIARLSALLIEQGHRVRTEGRSPAIPGEIVLINASALSANQDAFV
LLRKADLIVLVVRAQDTTVPMLEDTLNNLNTAFKKVDGIIINRRRFEVPEKVLSFLKRIG
SRG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatccgctcattccgcgacttgctgcgcctgctgttcatcttcctgcgcgaa
gtcaggattaccgtgctggcgacgttcgtcatcattcttctgggcgcgtttctgctccct
aaccgctatgagtccaccgccctgttgctggtcaagcccggccgcgacagcagcactgtg
ccaatcgagttgtccgaccgacaggccatcgtgataccgagcggcctgcgcgatccgctg
ctcgacgaggagcgcatgctcagcgggcggccgatcatgcgtgccgtgtccgagaaatac
ctcgccgagctgtccatggtgccgcctgaaaccggcgttctggcctcggtgaagaacggc
atcaagaccgtcgtcggagcgctggtcaacggcgtgcgcagcgttctgcaattcatcggg
ctggtggaacaccgctcccaggccgaacgtctggccgaggatctggagaaaaacttcaag
gtcagccatgagcctggctcatcagtgatggagctgaggtttacctggagcgacccggaa
gtcgcgcagaccgtgctcaggacctggatcaccgagtaccagacgcagcgcaccaagaca
ctgggccgggtcagcctgtacgcgttctacgaagcggaagtgaagacgaccggtgcgaac
atcatcgagtacaagaagcaaattcagaactacctgaaccagttgagcgcggtaagtatt
tcccagcgtctggccgatacctcgcaggcgctcaacgatctgcgcaccgagcgcaacaac
accacccgctcgattgcctcgaccaaggcaggtctggacctgctgaagaaacaactggca
gagcagccaaagaccgtctcggcaggccgcgaactggccctcaaccccaatcgccaggac
ttgcagaaccgcatcaacggcaaggaagtggagcgtcaggaaatgcttcgctcattcaag
gacgaggcgccaccgattcgtgcgatcaacgaggaagtcagtaacctcaaaaagctgctc
aaggaacaggacgccaccgtacagcgttccgaaagcatcacgcccaacccgatctacaac
cgcatgcagaacgtgtacgccgaccagcagaccagctacgcgcgcctgcaaacccagttc
atccagcagaacgagcaaatcgcgcaactggaacgcgaccgccagcaggcactgaatctg
gagccggaactgtcacgcctgcagaacgagctggatgcggcagaaaaaagctatgcactg
tacaaaaacagcctggaaaaatcgcgtatcgaccgtgaactggacaacagccagatcagt
aatatcgcgaccatcgaggaggcgaccttcaaccccagccgggtattcccgaaaagcctg
ctgatgctgtttctggcgttcccgctgagcgtcgtggtcggtgccgtggcgctgtacttc
ttctacctgctggaccagcgcattcatgacggcgacaagatcgaaagcagcttcggtgtt
ccggtctggaccagcctccccgacctggaacgtgcccaggaacgcagtgctgccctcacc
tcgaacctgcatcgggtgtacggcattctgccgctggaccaggtagaagagcgcgggctg
accatcggttttacttcggtcaagtacggggccggcgtgtcgttcgtgatcgcgcgcttg
agcgcgctactgatcgaacagggccatcgggtacgcaccgaaggccgcagtccggccatt
ccgggcgaaattgtgctgatcaacgcttcggcgctgtcggcgaaccaggatgccttcgtg
ctgttgcgcaaggctgacctgatcgtgctggtggttcgcgcccaggacaccacggtgccg
atgctggaagacacgctgaacaacctcaacaccgcgttcaagaaagtcgacggcatcatc
atcaaccgtcgtcgcttcgaagtgcctgaaaaggtcctgagttttctcaagcggatcggg
agccgaggctga
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