Pseudomonas syringae pv. syringae B728a: Psyr_3696
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Entry
Psyr_3696 CDS
T00246
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psb03009
]
Psyr_3696
Enzymes [BR:
psb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Psyr_3696
Ribosome biogenesis [BR:
psb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Psyr_3696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Methyltr_RsmB-F
TRM5-TYW2_MTfase
Methyltransf_11
RrnaAD
Cons_hypoth95
PCMT
Methyltransf_23
Methyltransf_15
PDGF
Motif
Other DBs
NCBI-ProteinID:
AAY38728
UniProt:
Q4ZQ44
LinkDB
All DBs
Position
complement(4383042..4384397)
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AA seq
451 aa
AA seq
DB search
MAKHERGLRFQPAGGVKTVQIPAGKKQRLTIERLSDDGRGIAFLEGKTWFVAGSLAGEEV
EARVLNARGKVVEARTERVFTASAMRRAPACEYFGRCGGCSVQHVPHEEQLALKQRMLAE
QLLRVANVVPDEWAAPLSGAELAYRRRARVAVRWDAKAKRLDVGFRAAASQDIVSIEHCP
VLVQALQPIMNELPGMLKSFSKPQVLGHVELFSGVATAVLLRHTASLVEADLALLQAFCS
RHGAQLWLHGEGEPQPASPGDTLGYRLEPWNLQLAWRPGDFIQVNASVNTAMIEQALQWL
APAKDERVMDLFCGLGNFALPLAGLARDVVAVEGVATMVERAAVNAMSNDLHNVRFFQAD
LSQPLTQADWAAEGFSAVLLDPPRDGAFEVVRQIRKTGARRLLYVSCNPATLARDAVELI
RQGYRLKRAGILDMFPQTAHVEAMALFEMSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcatgaaagaggtttgcgctttcagcctgcgggcggcgttaaaaccgtacag
attcctgctggcaaaaagcagcggctgaccattgagcggctgtccgacgacggtcgcggt
atcgcctttctcgagggtaaaacctggtttgtcgccggtagtctggccggcgaagaggtc
gaggcgcgcgtgctcaatgcgcgcggcaaggtcgtcgaggcgcgcaccgagcgggtgttc
actgccagcgccatgcgtcgcgctccggcctgtgagtatttcggtcgctgcggcggctgc
agtgttcagcatgtgccccatgaggaacagcttgccctgaaacagcgcatgctcgccgag
cagttgctgcgcgtggcgaacgtggtgccggatgaatgggcggcacctttgagtggtgcc
gagctggcctatcgccgacgcgcgcgggtcgcggttcgctgggatgccaaggccaaaagg
ctggatgtggggttccgcgcagccgccagccaggacatcgtcagcatcgaacactgtcca
gtgctggtacaagccttgcaaccgatcatgaatgagttgcctggcatgctgaaaagtttc
agcaagccgcaggtgctgggtcacgtcgagctgttcagtggggtggcgactgccgtgttg
ttgcgccacaccgcgtcgcttgtcgaggccgacctggcgctgttgcaggcgttttgctcc
aggcatggcgcgcagctgtggctgcacggcgaaggcgagccgcaaccggccagccccggc
gatacgctgggctaccggctggagccgtggaacctgcaactggcctggcgaccgggagat
ttcattcaggtcaacgcgtcggtcaataccgcgatgatcgagcaggccctgcaatggctg
gcgcctgcaaaagatgagcgtgtcatggatctgttctgtggtctgggcaatttcgccttg
ccactggcggggctggccagggacgtggtggcggtcgaaggcgttgcgaccatggtcgag
cgtgcagccgtcaacgcaatgagtaatgatctgcacaatgtgcggttttttcaggcggat
ctttcccagccgctgacacaggccgactgggcggcagaggggttttctgcggtactcttg
gacccaccgcgtgacggagcctttgaagtggtccgccagatcagaaagacgggggcccgg
cgactgctttatgtttcatgcaacccggcaactttggctcgtgacgcggtcgaactgatc
cgtcagggctaccgattaaaacgtgccggaatcctcgatatgtttcctcagacggcgcat
gtcgaggcgatggctttatttgaaatgagtaagtga
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