Pseudomonas syringae pv. syringae B728a: Psyr_3834
Help
Entry
Psyr_3834 CDS
T00246
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00061
Fatty acid biosynthesis
psb00071
Fatty acid degradation
psb01100
Metabolic pathways
psb01212
Fatty acid metabolism
psb02024
Quorum sensing
psb04146
Peroxisome
Module
psb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Psyr_3834
00071 Fatty acid degradation
Psyr_3834
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Psyr_3834
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psyr_3834
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psb01004
]
Psyr_3834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psb04147
]
Psyr_3834
Enzymes [BR:
psb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Psyr_3834
Lipid biosynthesis proteins [BR:
psb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Psyr_3834
Exosome [BR:
psb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Psyr_3834
Exosomal proteins of breast cancer cells
Psyr_3834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAY38864
UniProt:
Q4ZPQ8
LinkDB
All DBs
Position
complement(4569836..4571527)
Genome browser
AA seq
563 aa
AA seq
DB search
MIDNFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPRTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYH
LPKAIKFNDVLGKGRGQPVTDVSPGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR
ALMASNLDEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNSDGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCQVCEGYGM
TETSPVATVNPSQYVQMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQ
RQEATDEMIDSEGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGETIKVFVVAKPGVTLTKEQVMAHMRANLTGYKVPRSVEFRDVLPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgataacttctggaaggacaagtacccgtccggtatccctgccgatatcaacccc
gacgagtaccctaacgtccaggcggtcctgaagcagtcctgccagcgcttcgccgacaag
ccggcgttcagcaatctgggcaagaccatcacctacggtgagctgtatgagctgtccggc
gcgtttgccgcctggattcagcaacataccgacctgcagccgggcgaccgtatcgccgtg
cagctccccaacgtattgcagtacccgattgccgtcttcggtgcgattcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaatgac
tccggtgccaaggcgctggtgtgtctggcaaacatggcccatctggccgagaaggtcgta
cccaggacgcagatcaggcaggtgattgtcaccgaagtggccgacatgctgtcaccgttc
aagcgcttgctgatcaacagcgtcatcaagtacgtgaagaaaatggttccggcctatcac
ttgcccaaggccatcaaattcaacgatgtgctgggcaagggccgtggtcagccagtgacc
gacgtgtcgcccggcagcgtcgacgttgccgtgctgcagtacaccggcggcaccaccggg
gtggccaagggggcaatgctgacgcaccgcaacctgatcgccaacatgctgcaatgccgg
gcgctgatggcgtccaacctggacgaaggctgtgaaatcatcatcacgccgctgccgctg
tatcacatctacgccttcacctttcattgcatggcgatgatgctgcttggcaatcacaac
atcctgatcagcaacccgcgtgacctgccggccatggtcaaggaactttcgaaatggaag
ttcagcggctttgtcggtcttaacacgctgttcgtggccctgtgcaatagcgacggcttc
cgcaacctcgatttctcggcgttgaaagtcaccttgtccggcggcatggccttgcagcag
gccgccgccgagcgctggaagcaggtgacgggctgccaggtctgcgaaggctatggcatg
accgagaccagtccggtggccacggtcaatccttctcagtacgtgcagatgggcagcatc
ggcattcccgtgccgtcgaccctgtgcaaggtcatcgacgatgcgggcaatgagctggca
ttcggtgaaaccggcgagctgtgcatcaaggggccgcaggtcatgaaaggctactggcag
cgccaggaagcgaccgatgaaatgatcgacagcgaaggctggctgaagaccggcgacatc
gcgatcatccagcctgacggctacatccggattgtcgatcgcaagaaagatatgatcctg
atctccggtttcaatgtgtaccccaacgaactggaagacgtactggcgacacttcccggc
gtgcttcagtgcgcggcgatcggcgtcccggacgagaagtcgggcgagaccatcaaggtc
ttcgtggtggccaaacccggcgttaccctgaccaaggaacaggtcatggcgcacatgcgc
gccaacctgaccggctacaaagtgccgcgcagcgtcgaattccgcgacgtgctgccaacc
accaacgtcggcaagatcctgcgtcgcgagctgcgtgatgaggaattgaagaaactgggt
gtgaagaagtaa
DBGET
integrated database retrieval system
