Pseudomonas syringae pv. syringae B728a: Psyr_3839
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Entry
Psyr_3839 CDS
T00246
Name
(GenBank) type III helper protein HopAK1
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Psyr_3839
Enzymes [BR:
psb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
Psyr_3839
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AAY38869
UniProt:
Q4ZPQ3
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Position
4574582..4576213
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AA seq
543 aa
AA seq
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MNTINRNYYPVSGIPAQDAPAQTDQLPPQGQGIKPGHNSNLIDFGLTQQANGPHSSLNTL
GSRVQPTDTNTSSNMPGGNGEQVLNKLVQAIRNILNNLLSLLEGNLHNGSGPAQPQRDQT
PTLAQSPSSASPSSSPPSTPQGNAEKPFVVQNDHPSEKPVSLQKNTEPTSAAPSQTAPRT
TERSSATPDKTPARPDAVNPAVVHDLALPKTSTDTTAKPDNTVNAAKTATPAAHGQGADM
SGIMGFAKEANTTGGNGGEVVTVNTVADLKKYMEDDKARTVKLGANLSADSKVTINFGAN
KTLLGTDKGNSLHNIYLASGKTASNDIFQNLNFDHDSRYRENGDMQMFISSGQKYWIDHN
TYSGTKDQNAKGLDKLLYVGGTADNVSLTNSKFQNNEYGVILGQPDDSAQAKAEYKGYPR
MTIANNVFSNLDVRAPGLMRHGQFDVLNNSIDNFHLGFTATGDATILSQANYFAKGVDVS
DKASNSGVLDDYGDAHFKDIGSNVSFTQKSAVTAWTPSYQRDIKTAEAARAYDQANAGAK
TVS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgatcaacagaaactactaccccgtctccgggattcctgcgcaggacgccccg
gcacagaccgatcaactgccgcctcaaggccagggcatcaagccgggccacaatagcaac
ctgatcgacttcggcctgacacagcaggccaatggcccgcactcctcgctgaataccctg
ggctccagagtccagccgactgacacgaacacgtcttcaaatatgccgggtggcaacggt
gagcaggtactgaacaaacttgtgcaagcgatccgcaacatcctcaacaacctgctctcg
ctgctggaaggaaatctacacaacggctctgggcctgcacagcctcaacgcgatcagacg
ccgacgctcgctcaatcgccctcttccgcctccccttcctcgtcgccgccttcaacacct
cagggcaacgcagaaaaaccctttgtggtgcagaacgatcacccttcagaaaaacctgta
tcactgcaaaagaatacagagccgacgtccgctgcgccgtcacaaacagcaccccggacg
accgagcgaagcagtgccaccccagacaagacacccgccagacccgatgcggtaaacccg
gcagtggtccatgaccttgcgctgccgaaaacttcgacggacaccaccgccaaacccgat
aacacggttaacgcagccaaaaccgcgaccccggccgcgcatggccagggcgcggacatg
tccggcatcatgggtttcgccaaagaggccaacaccaccggcggtaacggcggcgaagtc
gtcacggtcaataccgtggcggacctcaagaagtacatggaggacgacaaagcccgcacc
gtcaaactgggggccaacctgtctgccgacagcaaggtgaccatcaactttggcgccaac
aagaccctgctgggcaccgacaagggcaacagcctgcacaacatctacctggccagcggc
aagaccgccagcaatgacatcttccagaacctgaacttcgaccacgacagccgttatcgc
gaaaacggtgacatgcagatgttcatcagcagcggtcagaaatactggatcgaccacaac
acctattcaggcaccaaggatcagaacgccaaaggcctggacaagctgctgtatgtcggc
gggacggcagacaacgtcagcctgaccaactctaaattccagaacaacgaatacggcgtg
attcttggtcagccggacgactccgctcaagccaaggccgagtacaagggctacccgcgc
atgaccatcgccaacaatgtgttcagcaaccttgatgttcgcgcacccggcctgatgcgt
catgggcaatttgatgtgctcaacaactcgatcgacaacttccatcttggcttcaccgcg
acgggggatgcgaccatcctttcgcaggccaactatttcgcgaaaggcgtggatgtttcc
gacaaggccagcaactccggcgtgctggatgactatggcgatgcgcacttcaaggacatc
ggcagcaatgtcagcttcacccagaagtcagcggtgaccgcgtggacgccgagctatcag
cgcgacatcaagaccgccgaagccgccagagcctatgaccaggccaatgccggcgccaaa
accgtgagctga
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