Pseudomonas syringae pv. syringae B728a: Psyr_3842
Help
Entry
Psyr_3842 CDS
T00246
Name
(GenBank) SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psb03021
]
Psyr_3842
Transcription machinery [BR:
psb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Psyr_3842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AAY38872
UniProt:
Q4ZPQ0
LinkDB
All DBs
Position
4577266..4580112
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DVITHFENWKMTVREVDDVDGLLVYHGLNAQNELVTLPETQLSNFIQFRLATDRLFAGQI
DQLSWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFMESDA
GNPFEDTQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDKASREYSLVEQL
AEVIAGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESENYRPVAQAVQELLDK
GKLSAAAQETIHGFLGAEGDSLLAAVNTGDEEAKSRLIRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHQYPLPCPVEYLELPVGEHADLYPEVSFQSHSDVSEEERWWRFDPRVDWLIDT
LKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHTIELHVPFLETSP
QARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLESGDDDKWQTLINEARSERERLE
SELHTGRDRLLELNSGGAGEGEALVEAILDQDDQFSLPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELIYVSEVVAPRSLQLGRYLPPAALRCLLDPNGNDLASRVSF
NTLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIMPKHAERVAEAQRRLAADTEEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagccgagctgggt
ttgggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gaaacacgtcagtacgcactgcgtaacgcgccgctgacccgcgtgcgcttctcccctggc
gacgtgatcacgcacttcgaaaactggaaaatgaccgttcgcgaagtcgacgatgtcgat
ggcctgctggtctaccacggcctgaacgcgcagaacgaactggtcacgctgccggaaacc
cagttgtcgaacttcatccagttccgcctggcgaccgaccgtctgttcgccggccagatc
gaccagttgtcgtggttctcgttgcgctacaacacgctcgagcacaccagccgccaattg
cagtcctcgctctggggcctgggtggcgtgcgcgcacagcctatcgcccaccagttgcac
atcgctcgtgaagttgcagaccgcatcgcgccacgcgttctgctggccgacgaagtgggc
ctgggtaaaaccatcgaagccggcctggtgatccatcgccaactgctgtcgggccgcgcc
agccgcgtgctgatcctggtcccggaaaacctccagcaccagtggctggtggagatgcgt
cgtcgcttcaacctgcaggtcgcgctgttcgacgccgagcgcttcatggaaagcgatgcc
ggcaacccgttcgaagacacccagctcgcgctggttgccctggaatggctggtcgaagac
gaaaaagcccaggacgccctgtttgcggcaggctgggacctgatggtggttgacgaagcg
caccacctggtctggcacgaagacaaggccagccgcgaatattcgctggtcgaacagctg
gccgaagtcattgctggcgtactgctgctgaccgcgacgccggaacaactgggccaggac
agccactttgcccgtctgcgcctgctggacccgaaccgtttccacgacctcaaggccttc
cgtgccgagagcgagaactatcgcccggtggctcaggccgttcaggaactgctcgacaag
ggcaagctgtccgcagcagcacaagagaccattcacggcttcctgggtgccgaaggcgat
tcgctgctggccgcggtgaataccggcgacgaagaagccaaatcgcgtctgattcgtgaa
ctgctcgaccgtcacggcaccggccgcgtgctgttccgcaacacccgtgccgcggtgcag
ggtttcccggagcgcaagctgcatcaatacccgctgccctgccccgtcgaatacctcgaa
ttgccggtcggcgagcacgccgacctttacccggaagtcagcttccagtcgcattcggac
gtcagtgaagaagagcgctggtggcgcttcgacccacgcgtcgactggctgatcgatacc
ctgaaaatgctcaagcgcgtcaaggtgctggtgatctgtgcccacgccgaaaccgccatg
gacctggaagacgcgctgcgtgtgcgttccggcattcctgccacggtgttccacgaaggc
atgaacattctcgagcgcgaccgtgccgcggcctattttgcggacgaagagttcggcgcc
caggtgctgatctgttcggaaatcggcagcgaaggccgcaacttccagttctcccaccat
ctggtcctgttcgatctgccgtcgcacccggacttgctggagcagcgtatcgggcgtctg
gaccggatcggccagaagcacaccatcgagctgcacgtgcctttcctggaaaccagtccg
caggcccgcctgttccagtggtatcacgaagcgctcaacgcgttcctcaatacctgcccg
accggcaacgccctgcagcatcagttcggcccgcgcctgctgccgctgctggaaagcggt
gacgacgacaagtggcaaaccctgatcaatgaagcccgcagcgaacgcgagcgtctggaa
agcgaactgcacaccggtcgcgaccgcttgctggagctcaattccggcggcgctggcgaa
ggtgaagcgctggtcgaagcaatcctcgatcaggacgatcagttcagcctgccgatctac
atggaaaccctgttcgacgcgtttggcatcgacagcgaggaccattcggaaaacgccctg
atcctcaaaccgagtgaaaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccattacctacgaccgcaatcaggcgctgtcccgcgaggacatgcagttcatcacc
tgggagcacccgatggtgcaaggcggcatggacctggtgctgtccggctcgatgggcaac
accgccgtggcactgatcaagaacaaggcgctcaagccgggcaccgttctgctcgaactg
atctacgtcagcgaagtggttgcgcctcgttctctgcagctgggacgttatctgccgcct
gccgcgctgcgctgcctgctcgacccgaatggcaacgatctggccagccgtgtgtcgttc
aacacgctcaatgatcagctcgaaagcgtgccccgtgccagcgccaacaagttcatccag
gcccaacgtgaccaactgaccccgaggatcaacgcgggcgaagagaaaatcatgccgaaa
cacgccgagcgcgtcgccgaagcgcagcgtcgcctggcagccgacaccgaagaagaactg
gcccgcctgacggcattgcaagcggtcaacccgaccgtgcgcgacagtgaactggtggct
ctgcgcactcaacgtgaacagggtctggccatgcttgaaaaagcggccctgcgtctggaa
gcgatccgggtactggtcgcaggctga
DBGET
integrated database retrieval system
