KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_3880
Entry
Psyr_3880         CDS       T00246                                 
Name
(GenBank) Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:psb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psb03400]
    Psyr_3880
Enzymes [BR:psb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Psyr_3880
    5.6.2.6  RNA 3'-5' helicase
     Psyr_3880
DNA repair and recombination proteins [BR:psb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Psyr_3880
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AAY38910
UniProt: Q4ZPL2
LinkDB
Position
4620466..4622958
AA seq 830 aa
MSRPTDFARRWFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFAK
ANTLTADNKPRKRKPPAEPLSVLWITPMRALAADTARALEAPLAELDIPWSVGLRTGDTS
GSERARQSRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQL
ALARLRRWNPQLIVWGISATLGNQQHAQQVLIGDGGVTVQGKIVKDLQVDTLLPSSIERF
PWAGHMGLRMLPQVVAEVESSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLA
REVRDWVERALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAP
GRPSRVTLVPTHSLELVEAAAAHDAVEARMIEPRESPHQPLDVLVQHLVSIALGGGFLPD
ELLGEVRSAWAYHDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEDGVWRVPDARLAR
RHRMSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVEN
MTAYVKRATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAARGQFNSPEMRAIKPLLEVQ
QHWSGLPRRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVN
DYGLELLSASEIDWSQTLQAELFSETDLLPDIIASLNAGELALRRFREIARISGLVFSGY
PGAAKSNRQLQASSGLFFEVFKQYDADNMLLTQAEQEVLRQELDLQRLELTLRQINSRTL
DLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAAGPEPER
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgagcagacccaccgatttcgctcgacgatggtttctcgcccggggctggaagcccttt
gcgtttcagaaagaggtctgggcagcggtgaagaatggcgagtccggtttgctgcatgcc
agcaccggctcgggcaagacctacgccgtgtggttcgccgcgctcaaccgcttcgccaaa
gccaatacgctcaccgctgacaacaaaccccgcaaacgcaaaccgcctgctgaaccgctg
agtgtcctgtggataacgcccatgcgcgccctggccgccgataccgcccgggcccttgag
gcgccactggccgaactggatatcccttggtcggtcggcttgcgcaccggcgataccagc
ggcagtgaacgcgcccggcagagccggcggctgccctcggccttgatcaccacccctgaa
agcctgacgctgctgctgacccgtgccgacgctcaggtcgccttgtcgacgctgaagatg
gtggtggtggacgaatggcacgagctgatcggcaacaagcgtggcgtgcagttgcaactg
gcccttgcccgcctgaggcgctggaatccacagctgatcgtgtggggcatttccgcgacg
ctgggtaatcagcaacacgcgcagcaggtgctgatcggcgacggcggcgtgaccgtgcaa
ggcaagatcgtcaaggacttgcaggtcgatacgctgttgccgtcttccatcgaacgcttc
ccgtgggccgggcacatgggcttgcgcatgttgccgcaggtcgtcgccgaggtggaaagc
agcgcgagctgtctggtgttcaccaacacccgggcgcagtcggaaatatggtatcaggcg
ctactggaggcccgccccgactgggccgggctgattgccctgcaccatggatcgctggcc
cgagaggtccgcgactgggtcgaacgcgcgttgaaagaaggcgcactcaaggccgtggta
tgcacctccagcctggacctgggcgtggactttctgccggtcgagcgcgtgttgcaaatc
ggctcgcccaaaggtgtcgcgcgcctgatgcagcgcgccggtcgttcgggccacgcgccg
ggtcgcccttcgcgcgtgacgctggtgccgacccacagcctggaactggtcgaagccgct
gctgcacatgacgccgtcgaagctcggatgatcgagccccgtgagtcaccacaccagccg
ctggacgtgctggtccagcacctggtcagcatcgccctgggcggtggttttctgcccgat
gaactgctgggcgaagtacgcagcgcctgggcttaccacgacctcagcgacgagcaatgg
caatgggcgctggcgtttgtccgcaacggcggccactcactgaccgcctaccccgattac
cgccgcgccgaacccgacgaggacggcgtctggcgggtccctgatgcgcgtcttgccaga
cgccaccgcatgagcgtggggaccatcgtcagtgaggccaccgtcaacctgaaatactgg
aaaaaaggcggcggtggtggctctctgggcagcgtcgaggaaggctttatcgccagactc
aaacccggtgacggctttctgttcggcggacgcttactggaattggttcgagtagaaaac
atgacggcctacgtcaagcgcgcgaccggcaagaaagccgccgtgccacgctggaatggc
ggtcggatgccgctgtccagcgaactggcagatgcagtggtggagaagttcgatgccgct
gcgcggggccaattcaacagcccggaaatgcgcgccatcaaacccctgctggaagtgcag
cagcactggtcagggctgccgagacgcgacacgttgctggccgagacactcaaatcccgc
gaaggctggcatctattcctctacccgttcgccggccgtcatgtgcacctggggctgggc
agcctgctggcctggcgcctgagccggcatcggccgctgaccttttccatcgccgtcaac
gactacgggctggagctgctcagcgccagcgagatcgactggtcgcagacgttgcaggcc
gagctgttcagcgaaacggatcttttacccgatatcatcgccagcctgaacgctggcgag
ctggccctgcggcgctttcgggaaatcgcgcgtatctccgggttggtgttttccggctac
cctggcgcggccaagagcaatcgtcagcttcaggcatccagcggactgtttttcgaggtg
ttcaagcaatacgacgctgacaacatgctgctgactcaggccgaacaggaggtcctgcgt
caggaactggacctgcagcgcctggagctgacgttgcgccagatcaacagccgcacgctg
gacctgcacgctataaaacgcgcgaccccgctggcctttccactgctggtcgaacgcttt
cgcgaaagcctcagttcggagaaacttgccgaccgcatcgcgcgcatggttcgcgatctg
gagaaagccgctggcccggagcctgaacgatga

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