Pseudomonas syringae pv. syringae B728a: Psyr_3951
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Entry
Psyr_3951 CDS
T00246
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psb03019
]
Psyr_3951
03009 Ribosome biogenesis [BR:
psb03009
]
Psyr_3951
03036 Chromosome and associated proteins [BR:
psb03036
]
Psyr_3951
Enzymes [BR:
psb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Psyr_3951
Messenger RNA biogenesis [BR:
psb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psyr_3951
Ribosome biogenesis [BR:
psb03009
]
Eukaryotic type
90S particles
RNase
Psyr_3951
Prokaryotic type
rRNA processing factors
Psyr_3951
Chromosome and associated proteins [BR:
psb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Psyr_3951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AAY38981
UniProt:
Q4ZPE1
LinkDB
All DBs
Position
complement(4698686..4699375)
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtatccttgagccgccttgagcgtcagctcggctacaccttcaaggatcaggag
ctgatggtcctggccctgacccatcgcagttttgccggtcgcaacaatgagcgtctggag
tttctcggtgatgccattctcaacttcgtggccggcgaggcgctgttcgagcgcttcccc
caggctcgcgaaggccagttgtcccgcttgcgcgcgcggctggtgaagggcgaaaccctg
gcgttgctggcgcgtggttttgatctgggcgagtacttgcgccttggctcgggcgagttg
aaaagcggtggtttccgtcgtgagtcgattctcgccgacgcgctcgaggcgctgatcggg
gcgatctatctggatgcaggcatggaagcagcgcgcgagcgcgtcctggcctggctgacc
accgaatttgacagcctgacgctggtggacaccaacaaggaccccaagacccgactgcag
gaatttctccagtcgcgggcctgtgaactgccgcgttacgaggtggtggatatccagggc
gaaccgcattgccggacgtttttcgtcgaatgcgagatcaacctattgaatgaaaaaagc
cgaggacagggtgtcagccgccggattgccgaacaggtagccgccgcagcagcactcatc
gccctgggcgtggagaacggtcatgaatga
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