Pseudomonas syringae pv. syringae B728a: Psyr_4104
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Entry
Psyr_4104 CDS
T00246
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb00470
D-Amino acid metabolism
psb00550
Peptidoglycan biosynthesis
psb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Psyr_4104
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psyr_4104
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psb01011
]
Psyr_4104
Enzymes [BR:
psb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Psyr_4104
Peptidoglycan biosynthesis and degradation proteins [BR:
psb01011
]
Precursor biosynthesis
Amino acid ligase
Psyr_4104
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AAY39134
UniProt:
Q4ZNY8
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Position
complement(4893201..4894547)
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AA seq
448 aa
AA seq
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MSLIVSDRFRIVVGLGKSGMSLVRFLANQGVSFAVADTRENPPELATLRRDYPQVEVRCG
ELDVDFLCRADELYVSPGLALATPALQQAHARGVKLSGDIELFARYAKAPVIAITGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDEVELYVMELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNGQDALSRPLIGEGLPCWTFGLNKPD
FHGFGLREENGEKYLAFQFENLMPVRELKVRGAHNQANALAALALGHAVGLPFDAMLASL
REFTGLEHRCQWLREHDGVHYYNDSKATNVGAALAAIEGLGSDIDGKLVLIAGGDGKGAD
FSGLRAPVARHCRAAVLLGRDAELIAQALGDAVPLLRVDTVQAAVEHSAKLAQCGDAVLL
SPACASLDMFKNYEERGRVFAQAVECLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgtttccgaccgcttccgcattgtcgtgggtctaggcaaaagcggcatg
tccctggttcgcttcctggcgaaccagggcgtgtcctttgccgtggccgacacgcgggag
aatcctcctgagctggcgaccttgcgtcgcgactatccgcaggtggaagtgcgttgtggc
gagctggacgtggatttcctctgccgtgccgatgagctgtatgtcagccccggtctggcc
ctggccaccccggccctgcagcaggcgcacgcacgcggcgtcaaactgtcgggtgacatc
gaactgttcgcgcgttacgcgaaggcgccggtgattgccattaccggctcgaatgcaaaa
agcaccgtgaccacgctggtcggcgagatggccgctgccgctggaaagcgtgtagcggtg
ggcggcaatcttggcactccggcgctggacctgctcagcgatgaggtcgagctgtacgtg
atggagctctccagctttcagctcgaaaccaccgaccagctcaatgctgaagtggcgacc
gtgctgaatatcagcgaagaccatatggaccgctacagcggcctgcctgcctaccacctg
gccaagcaccggattttccgtggcgcgcggcaagtggtggtcaatggtcaggatgcgctg
tcccgtccgctgattggcgaaggcctgccgtgctggacattcggcctcaacaagcccgac
ttccatggtttcggcctgcgtgaagagaacggcgaaaagtacctggcgttccagtttgaa
aacctcatgccggtgcgtgagctgaaagtgcgcggtgcgcacaatcaggccaacgcgctt
gccgccctggcgctcgggcatgcggtcggcctgccgttcgacgccatgctcgccagcctg
cgtgaattcaccggcctggagcatcgctgccagtggctgcgcgagcacgatggcgttcat
tactacaacgattccaaagccaccaatgtcggtgccgcactggctgccatcgaagggctg
ggctcggatatcgacggcaagctggtgctgatcgccggcggcgatggcaaaggcgccgat
ttcagcggtttgcgtgcgccagtcgccaggcattgccgcgcggcggtactgcttgggcgt
gatgccgagctgattgcccaggcattgggcgacgccgttccgctgctgcgtgtcgacacc
gtccaggcggctgtcgagcacagcgcaaaactggcgcagtgtggcgacgccgtattgctt
tctcctgcatgcgccagtctggacatgttcaagaattatgaagagcgcggacgtgtgttc
gcgcaggcagtggagtgcttgtcatga
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