Pseudomonas syringae pv. syringae B728a: Psyr_4178
Help
Entry
Psyr_4178 CDS
T00246
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psb03016
]
Psyr_4178
Enzymes [BR:
psb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Psyr_4178
Transfer RNA biogenesis [BR:
psb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Psyr_4178
Prokaryotic type
Psyr_4178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AAY39208
UniProt:
Q4ZNR4
LinkDB
All DBs
Position
complement(4970069..4970986)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTADSEGEVLLTRPVTVGRDDIEAALPHFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVAEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgccgcaatgtcagcgggatcatcctgctcgacaagcca
ctgggtttcacctccaacgccgctctgcaaaaggttcgctggctgctcaacgccgagaaa
gccggtcacaccggcagcctcgatcctctggcaacgggcgttctgccgttgtgctttggt
gaggcgaccaagttctctcagtacctgctcgattcggacaagtcctacgagaccctggcg
caactgggcaagaccactaccactgccgactctgaaggcgaggttttgctcacgcgtccg
gtgaccgttggtcgcgacgatatcgaagcggctctgccgcattttcgcggacaaatcagc
cagatacctcccatgtactcggccctcaagcgtgatggccagccactttacaagctggca
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctggaatta
cttgcttgtgaaggtgacacagcacgtctgtccgtcgattgcagcaaaggcacctatatc
cgcacgctggtcgaggatatcggtgagaagcttggttgtggtgcttacgtcgcagagctg
cgtcgtacccaggccgggcctttcacgctggctcagacagtgacgctggaagagctcgag
caggtgcatgccgacggcggcaatgaagcggttgaccgtttcctgatgccatcggacagc
ggtctgctggactggccgctgttgaagttttcggaacacagttcgttttactggttgcat
ggtcagccagtacgcgcgccggacgcaccgaaattcggtatggttcgcgtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcgccgaagacgggcgcattgcgccgcgtcgc
ttgattcggtcagagtga
DBGET
integrated database retrieval system
