Pseudomonas syringae pv. syringae B728a: Psyr_4181
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Entry
Psyr_4181 CDS
T00246
Name
(GenBank) Transcription termination factor NusA:Transcription termination factor NusA, C-terminal duplication
KO
K02600
transcription termination/antitermination protein NusA
Organism
psb
Pseudomonas syringae pv. syringae B728a
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psb03021
]
Psyr_4181
03009 Ribosome biogenesis [BR:
psb03009
]
Psyr_4181
Transcription machinery [BR:
psb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Psyr_4181
Ribosome biogenesis [BR:
psb03009
]
Prokaryotic type
rRNA transcription factors
Psyr_4181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AAY39211
UniProt:
Q4ZNR1
LinkDB
All DBs
Position
complement(4974119..4975600)
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVELRVEINRQTGNYETFR
RWTVVEDEDLDDPAYELAVDQAQAKKPGAVAGDLIEEKIDSIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
VRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtgtccaatgaaaagggcgttccggct
agtgtcatttttgaagcgctggagctggctctggccaccgctaccaagaagcgttttgaa
gatgaagtagaactgcgtgtagagatcaatcgccagacaggcaactacgagactttccgt
cgctggacagttgtcgaagacgaagatctggacgatcctgcttacgaattggctgttgat
caggcccaggcgaaaaagccgggtgctgttgcaggcgacctgatcgaagaaaaaatcgat
tccatcgaattcggtcgtatcgcggcgcagaccgccaagcaagtcattgtgcagaaagtt
cgcgaagccgagcgtgctcaggtagtcgatgcctaccgcgagcgtctgggtgaaatcatt
tctggtactgttaaaaaggttacacgtgacaatgtcatcgttgacctgggtaacaatgcc
gaagccttgctggctcgtgaagacatcatttcccgggaaactttccgggtcggtgttcgc
gtccgtgctctgctgaaagaaattcgcaccgaaaaccgtggccctcagctgatcctgtcg
cgtactgcgccagagatgctgatcgagcttttccgcattgaagtgccggaaattgccgaa
ggtctcatcgaggtgatggctgcctcccgtgacccgggttctcgtgcgaaaatcgctgtt
cgctccaaggataaacgaatcgacccgcaaggtgcctgtatcggcatgcgcggttcgcga
gttcaggctgtttccggcgagctgggtggcgagcgtgtggatatcgttctctgggacgat
aacccggcgcagttcgtgatcaatgcaatgtcccctgcagaagtagcggcaatcatcgta
gatgaagacgcgcatgcaatggatatcgcagtgggagcggacaacctggcccaggctatt
ggtcgtggcggtcagaacgtgcgtctggcaagtcagctgactggctggaccctgaacgta
atgaccgaatcggacatccaggccaagcagcaagctgaaaccggtgacatcctgcgcaac
ttcatcgaagagctcgaagtcgatgaagaattggcacaggtgctggttgatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacatcgtcaacgagcttcgcgctcgtgccaaggatcgtttgttgactaaagcc
atcgctacagaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctatagatgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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